Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.14■□□□□ 0.98
CNOT9Q92600 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT9Q92600 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CNOT9Q92600 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CNOT9Q92600 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT9Q92600 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT9Q92600 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
CNOT9Q92600 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT9Q92600 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT9Q92600 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT9Q92600 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT9Q92600 KRT18P24-201ENST00000344739 1156 ntBASIC21.14■□□□□ 0.97
CNOT9Q92600 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT9Q92600 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CNOT9Q92600 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CNOT9Q92600 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT9Q92600 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.14■□□□□ 0.97
CNOT9Q92600 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT9Q92600 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT9Q92600 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT9Q92600 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT9Q92600 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT9Q92600 AC103834.1-201ENST00000520383 144 ntBASIC21.13■□□□□ 0.97
CNOT9Q92600 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT9Q92600 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CNOT9Q92600 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 MIR4508-201ENST00000584178 70 ntBASIC21.12■□□□□ 0.97
CNOT9Q92600 THA1P-201ENST00000590384 1145 ntBASIC21.12■□□□□ 0.97
CNOT9Q92600 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT9Q92600 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT9Q92600 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT9Q92600 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CNOT9Q92600 KRT8P33-201ENST00000508125 1423 ntBASIC21.12■□□□□ 0.97
CNOT9Q92600 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT9Q92600 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT9Q92600 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.11■□□□□ 0.97
CNOT9Q92600 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.11■□□□□ 0.97
CNOT9Q92600 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.11■□□□□ 0.97
CNOT9Q92600 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT9Q92600 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT9Q92600 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CNOT9Q92600 MIR4281-201ENST00000580852 62 ntBASIC21.1■□□□□ 0.97
CNOT9Q92600 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.1■□□□□ 0.97
CNOT9Q92600 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT9Q92600 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT9Q92600 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNOT9Q92600 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT9Q92600 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.09■□□□□ 0.97
CNOT9Q92600 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNOT9Q92600 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNOT9Q92600 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CNOT9Q92600 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 AC131274.2-201ENST00000580697 1507 ntBASIC21.09■□□□□ 0.97
CNOT9Q92600 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT9Q92600 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT9Q92600 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT9Q92600 AL022069.1-201ENST00000568025 1636 ntBASIC21.08■□□□□ 0.97
CNOT9Q92600 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT9Q92600 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT9Q92600 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT9Q92600 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.08■□□□□ 0.96
CNOT9Q92600 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT9Q92600 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT9Q92600 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CNOT9Q92600 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 AL161729.1-201ENST00000604104 1402 ntBASIC21.07■□□□□ 0.96
CNOT9Q92600 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.07■□□□□ 0.96
CNOT9Q92600 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNOT9Q92600 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CNOT9Q92600 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT9Q92600 AF131216.4-201ENST00000638924 1588 ntBASIC21.06■□□□□ 0.96
CNOT9Q92600 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT9Q92600 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT9Q92600 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms