Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 AL158047.1-201ENST00000445918 881 ntBASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 AC008550.1-201ENST00000511500 884 ntBASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 AL050303.2-201ENST00000619798 666 ntBASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYNE2Q8WXH0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 AP004833.2-201ENST00000532228 1454 ntBASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 LINC01023-201ENST00000606054 436 ntBASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC9.65□□□□□ -0.86
SYNE2Q8WXH0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 MIR6084-201ENST00000622012 110 ntBASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
SYNE2Q8WXH0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AC137761.2-201ENST00000561729 223 ntBASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AC145350.3-201ENST00000569033 163 ntBASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AC099791.2-201ENST00000605725 427 ntBASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AL138724.1-201ENST00000606771 1088 ntBASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC9.64□□□□□ -0.87
SYNE2Q8WXH0 USP36-216ENST00000589424 970 ntTSL 5 BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 TSPY6P-201ENST00000448518 926 ntBASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 CCDC92B-201ENST00000575506 885 ntBASIC9.63□□□□□ -0.87
SYNE2Q8WXH0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 AP005435.1-201ENST00000529293 1178 ntBASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 AC098934.4-201ENST00000564127 592 ntBASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 RCN1P1-201ENST00000400413 996 ntBASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC9.62□□□□□ -0.87
SYNE2Q8WXH0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 DBI-210ENST00000542275 757 ntTSL 5 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 TPM4P1-201ENST00000436100 807 ntBASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 AC100797.4-201ENST00000631653 1827 ntBASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYNE2Q8WXH0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms