Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC35.72■■■■□ 3.31
CCNB3Q8WWL7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC35.72■■■■□ 3.31
CCNB3Q8WWL7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CCNB3Q8WWL7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CCNB3Q8WWL7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC35.72■■■■□ 3.31
CCNB3Q8WWL7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 ZNRF2P3-201ENST00000424200 374 ntBASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
CCNB3Q8WWL7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CCNB3Q8WWL7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CCNB3Q8WWL7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
CCNB3Q8WWL7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC35.7■■■■□ 3.31
CCNB3Q8WWL7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC35.7■■■■□ 3.3
CCNB3Q8WWL7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 AC135279.3-201ENST00000610945 1311 ntBASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCNB3Q8WWL7 SUDS3P1-201ENST00000505831 966 ntBASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 AC142381.2-201ENST00000566120 298 ntBASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3
CCNB3Q8WWL7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
CCNB3Q8WWL7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC35.67■■■■□ 3.3
CCNB3Q8WWL7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC35.67■■■■□ 3.3
CCNB3Q8WWL7 AC131274.2-201ENST00000580697 1507 ntBASIC35.67■■■■□ 3.3
CCNB3Q8WWL7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CCNB3Q8WWL7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
CCNB3Q8WWL7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CCNB3Q8WWL7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CCNB3Q8WWL7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
CCNB3Q8WWL7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CCNB3Q8WWL7 AC005703.6-201ENST00000623265 1329 ntBASIC35.66■■■■□ 3.3
CCNB3Q8WWL7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 AC024257.2-201ENST00000549699 147 ntBASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 AC020928.2-201ENST00000588717 2197 ntBASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CCNB3Q8WWL7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
CCNB3Q8WWL7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC35.64■■■■□ 3.3
CCNB3Q8WWL7 AC022211.4-201ENST00000625094 2161 ntBASIC35.64■■■■□ 3.3
CCNB3Q8WWL7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC35.64■■■■□ 3.3
CCNB3Q8WWL7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CCNB3Q8WWL7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CCNB3Q8WWL7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC35.63■■■■□ 3.29
CCNB3Q8WWL7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC35.63■■■■□ 3.29
CCNB3Q8WWL7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CCNB3Q8WWL7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCNB3Q8WWL7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC35.61■■■■□ 3.29
CCNB3Q8WWL7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CCNB3Q8WWL7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC35.6■■■■□ 3.29
CCNB3Q8WWL7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC35.6■■■■□ 3.29
CCNB3Q8WWL7 EDA-201ENST00000338901 1233 ntBASIC35.6■■■■□ 3.29
CCNB3Q8WWL7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
CCNB3Q8WWL7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CCNB3Q8WWL7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CCNB3Q8WWL7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CCNB3Q8WWL7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
CCNB3Q8WWL7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC35.59■■■■□ 3.29
CCNB3Q8WWL7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CCNB3Q8WWL7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC35.58■■■■□ 3.29
CCNB3Q8WWL7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
CCNB3Q8WWL7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms