Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF138Q8WVD3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF138Q8WVD3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF138Q8WVD3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
RNF138Q8WVD3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF138Q8WVD3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21■□□□□ 0.95
RNF138Q8WVD3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RNF138Q8WVD3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF138Q8WVD3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF138Q8WVD3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21■□□□□ 0.95
RNF138Q8WVD3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21■□□□□ 0.95
RNF138Q8WVD3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21■□□□□ 0.95
RNF138Q8WVD3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF138Q8WVD3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF138Q8WVD3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF138Q8WVD3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RNF138Q8WVD3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF138Q8WVD3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF138Q8WVD3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF138Q8WVD3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF138Q8WVD3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF138Q8WVD3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF138Q8WVD3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF138Q8WVD3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF138Q8WVD3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF138Q8WVD3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF138Q8WVD3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF138Q8WVD3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF138Q8WVD3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 MTDHP2-201ENST00000601468 714 ntBASIC20.96■□□□□ 0.95
RNF138Q8WVD3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF138Q8WVD3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF138Q8WVD3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF138Q8WVD3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF138Q8WVD3 TSPY9P-201ENST00000440215 945 ntBASIC20.95■□□□□ 0.94
RNF138Q8WVD3 TSPY11P-201ENST00000442607 1045 ntBASIC20.95■□□□□ 0.94
RNF138Q8WVD3 AC010997.5-201ENST00000609182 354 ntBASIC20.95■□□□□ 0.94
RNF138Q8WVD3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF138Q8WVD3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 AL356441.2-201ENST00000443009 864 ntBASIC20.94■□□□□ 0.94
RNF138Q8WVD3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF138Q8WVD3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF138Q8WVD3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF138Q8WVD3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF138Q8WVD3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF138Q8WVD3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 KRT16P3-201ENST00000439127 1283 ntBASIC20.92■□□□□ 0.94
RNF138Q8WVD3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.92■□□□□ 0.94
RNF138Q8WVD3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF138Q8WVD3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 AC004812.2-201ENST00000611079 2094 ntBASIC20.91■□□□□ 0.94
RNF138Q8WVD3 MIR6724-1-201ENST00000616420 92 ntBASIC20.91■□□□□ 0.94
RNF138Q8WVD3 MIR6724-2-201ENST00000616483 92 ntBASIC20.91■□□□□ 0.94
RNF138Q8WVD3 MIR6724-4-201ENST00000617390 92 ntBASIC20.91■□□□□ 0.94
RNF138Q8WVD3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF138Q8WVD3 MIR6724-3-201ENST00000622482 92 ntBASIC20.91■□□□□ 0.94
RNF138Q8WVD3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms