Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.39■■■□□ 2.13
SNED1Q8TER0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNED1Q8TER0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.38■■■□□ 2.13
SNED1Q8TER0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNED1Q8TER0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.38■■■□□ 2.13
SNED1Q8TER0 AL121749.1-202ENST00000609313 2153 ntBASIC28.38■■■□□ 2.13
SNED1Q8TER0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.38■■■□□ 2.13
SNED1Q8TER0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
SNED1Q8TER0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNED1Q8TER0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
SNED1Q8TER0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
SNED1Q8TER0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.37■■■□□ 2.13
SNED1Q8TER0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SNED1Q8TER0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNED1Q8TER0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNED1Q8TER0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNED1Q8TER0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.36■■■□□ 2.13
SNED1Q8TER0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.35■■■□□ 2.13
SNED1Q8TER0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNED1Q8TER0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.35■■■□□ 2.13
SNED1Q8TER0 AC099791.1-201ENST00000416440 715 ntBASIC28.35■■■□□ 2.13
SNED1Q8TER0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.35■■■□□ 2.13
SNED1Q8TER0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNED1Q8TER0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.35■■■□□ 2.13
SNED1Q8TER0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNED1Q8TER0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNED1Q8TER0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SNED1Q8TER0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SNED1Q8TER0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.35■■■□□ 2.13
SNED1Q8TER0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
SNED1Q8TER0 AC009102.2-201ENST00000606772 1639 ntBASIC28.34■■■□□ 2.13
SNED1Q8TER0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SNED1Q8TER0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNED1Q8TER0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.34■■■□□ 2.13
SNED1Q8TER0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNED1Q8TER0 AC010501.1-201ENST00000606270 1962 ntBASIC28.34■■■□□ 2.13
SNED1Q8TER0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNED1Q8TER0 IRS3P-201ENST00000223076 1006 ntBASIC28.34■■■□□ 2.13
SNED1Q8TER0 AC136469.2-201ENST00000623944 1028 ntBASIC28.34■■■□□ 2.13
SNED1Q8TER0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.34■■■□□ 2.13
SNED1Q8TER0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNED1Q8TER0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SNED1Q8TER0 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.33■■■□□ 2.13
SNED1Q8TER0 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.33■■■□□ 2.13
SNED1Q8TER0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNED1Q8TER0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SNED1Q8TER0 C17orf82-201ENST00000623772 1530 ntBASIC28.33■■■□□ 2.13
SNED1Q8TER0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNED1Q8TER0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.33■■■□□ 2.13
SNED1Q8TER0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.33■■■□□ 2.13
SNED1Q8TER0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.32■■■□□ 2.12
SNED1Q8TER0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNED1Q8TER0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.32■■■□□ 2.12
SNED1Q8TER0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.31■■■□□ 2.12
SNED1Q8TER0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SNED1Q8TER0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.31■■■□□ 2.12
SNED1Q8TER0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.31■■■□□ 2.12
SNED1Q8TER0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.31■■■□□ 2.12
SNED1Q8TER0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNED1Q8TER0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
SNED1Q8TER0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SNED1Q8TER0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.3■■■□□ 2.12
SNED1Q8TER0 AC008764.7-201ENST00000593779 1081 ntBASIC28.3■■■□□ 2.12
SNED1Q8TER0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.3■■■□□ 2.12
SNED1Q8TER0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNED1Q8TER0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNED1Q8TER0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
SNED1Q8TER0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.29■■■□□ 2.12
SNED1Q8TER0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.29■■■□□ 2.12
SNED1Q8TER0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.29■■■□□ 2.12
SNED1Q8TER0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNED1Q8TER0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNED1Q8TER0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNED1Q8TER0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNED1Q8TER0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNED1Q8TER0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.27■■■□□ 2.12
SNED1Q8TER0 AC006455.2-201ENST00000429931 906 ntBASIC28.27■■■□□ 2.12
SNED1Q8TER0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNED1Q8TER0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNED1Q8TER0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNED1Q8TER0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNED1Q8TER0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.26■■■□□ 2.12
SNED1Q8TER0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.26■■■□□ 2.12
SNED1Q8TER0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNED1Q8TER0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNED1Q8TER0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNED1Q8TER0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNED1Q8TER0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SNED1Q8TER0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.26■■■□□ 2.11
SNED1Q8TER0 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.26■■■□□ 2.11
SNED1Q8TER0 AL031602.1-201ENST00000633169 911 ntBASIC28.26■■■□□ 2.11
SNED1Q8TER0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNED1Q8TER0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
SNED1Q8TER0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms