Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 AL033527.3-201ENST00000566366 1196 ntBASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TRAF3IP1Q8TDR0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAF3IP1Q8TDR0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 PVT1_1.1-201ENST00000615125 194 ntBASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TRAF3IP1Q8TDR0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 AL161729.1-201ENST00000604104 1402 ntBASIC23.84■■□□□ 1.41
TRAF3IP1Q8TDR0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.83■■□□□ 1.41
TRAF3IP1Q8TDR0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.83■■□□□ 1.41
TRAF3IP1Q8TDR0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.83■■□□□ 1.41
TRAF3IP1Q8TDR0 AC120024.1-201ENST00000562672 995 ntBASIC23.83■■□□□ 1.41
TRAF3IP1Q8TDR0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.83■■□□□ 1.4
TRAF3IP1Q8TDR0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 AL022069.1-201ENST00000568025 1636 ntBASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 THA1P-201ENST00000590384 1145 ntBASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAF3IP1Q8TDR0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAF3IP1Q8TDR0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.8■■□□□ 1.4
TRAF3IP1Q8TDR0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAF3IP1Q8TDR0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TRAF3IP1Q8TDR0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAF3IP1Q8TDR0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRAF3IP1Q8TDR0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAF3IP1Q8TDR0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAF3IP1Q8TDR0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 KRT18P24-201ENST00000344739 1156 ntBASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TRAF3IP1Q8TDR0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAF3IP1Q8TDR0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.76■■□□□ 1.39
TRAF3IP1Q8TDR0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms