Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPEB3Q8NE35 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.08■□□□□ 0.81
CPEB3Q8NE35 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPEB3Q8NE35 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CPEB3Q8NE35 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPEB3Q8NE35 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CPEB3Q8NE35 AC131274.2-201ENST00000580697 1507 ntBASIC20.07■□□□□ 0.8
CPEB3Q8NE35 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPEB3Q8NE35 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 AC009299.2-201ENST00000482477 511 ntBASIC20.06■□□□□ 0.8
CPEB3Q8NE35 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPEB3Q8NE35 AL022069.1-201ENST00000568025 1636 ntBASIC20.05■□□□□ 0.8
CPEB3Q8NE35 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPEB3Q8NE35 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPEB3Q8NE35 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.04■□□□□ 0.8
CPEB3Q8NE35 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPEB3Q8NE35 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPEB3Q8NE35 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPEB3Q8NE35 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.04■□□□□ 0.8
CPEB3Q8NE35 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 BX664725.1-201ENST00000438252 379 ntBASIC20.03■□□□□ 0.8
CPEB3Q8NE35 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 AC021242.3-201ENST00000607598 1377 ntBASIC20.03■□□□□ 0.8
CPEB3Q8NE35 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPEB3Q8NE35 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.02■□□□□ 0.8
CPEB3Q8NE35 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPEB3Q8NE35 ABCB10P4-201ENST00000566803 2184 ntBASIC20.01■□□□□ 0.79
CPEB3Q8NE35 AL161729.1-201ENST00000604104 1402 ntBASIC20.01■□□□□ 0.79
CPEB3Q8NE35 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20■□□□□ 0.79
CPEB3Q8NE35 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20■□□□□ 0.79
CPEB3Q8NE35 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20■□□□□ 0.79
CPEB3Q8NE35 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20■□□□□ 0.79
CPEB3Q8NE35 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20■□□□□ 0.79
CPEB3Q8NE35 Z92544.1-202ENST00000571933 1220 ntBASIC20■□□□□ 0.79
CPEB3Q8NE35 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20■□□□□ 0.79
CPEB3Q8NE35 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPEB3Q8NE35 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPEB3Q8NE35 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 AC239859.2-201ENST00000444165 318 ntBASIC19.99■□□□□ 0.79
CPEB3Q8NE35 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPEB3Q8NE35 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CPEB3Q8NE35 AC004448.1-201ENST00000458332 883 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms