Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF439Q8NDP4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 AC010980.1-201ENST00000587192 1142 ntBASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF439Q8NDP4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 AL033527.3-201ENST00000566366 1196 ntBASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF439Q8NDP4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF439Q8NDP4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF439Q8NDP4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF439Q8NDP4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF439Q8NDP4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF439Q8NDP4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF439Q8NDP4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 AC120024.1-201ENST00000562672 995 ntBASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF439Q8NDP4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ZNF439Q8NDP4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF439Q8NDP4 AL161729.1-201ENST00000604104 1402 ntBASIC18.88■□□□□ 0.61
ZNF439Q8NDP4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF439Q8NDP4 ABCB10P4-201ENST00000566803 2184 ntBASIC18.88■□□□□ 0.61
ZNF439Q8NDP4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 KRT18P24-201ENST00000344739 1156 ntBASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms