Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SYNPOQ8N3V7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 MIR6821-201ENST00000617625 74 ntBASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 AC091060.1-201ENST00000623524 1766 ntBASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYNPOQ8N3V7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SYNPOQ8N3V7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SYNPOQ8N3V7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SYNPOQ8N3V7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SYNPOQ8N3V7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SYNPOQ8N3V7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.47■■□□□ 1.35
SYNPOQ8N3V7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SYNPOQ8N3V7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SYNPOQ8N3V7 RASA4CP-201ENST00000424092 1398 ntBASIC23.46■■□□□ 1.35
SYNPOQ8N3V7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SYNPOQ8N3V7 AL138724.1-201ENST00000606771 1088 ntBASIC23.46■■□□□ 1.35
SYNPOQ8N3V7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SYNPOQ8N3V7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
SYNPOQ8N3V7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 AC097381.1-201ENST00000429019 1296 ntBASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.45■■□□□ 1.34
SYNPOQ8N3V7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 MIR4767-201ENST00000582827 78 ntBASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SYNPOQ8N3V7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 AC011298.3-201ENST00000615796 283 ntBASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.43■■□□□ 1.34
SYNPOQ8N3V7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 CA15P2-201ENST00000611168 834 ntBASIC23.42■■□□□ 1.34
SYNPOQ8N3V7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 AC027682.1-201ENST00000562846 899 ntBASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SYNPOQ8N3V7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 SERBP1P1-201ENST00000396021 1160 ntBASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 AC010501.1-201ENST00000606270 1962 ntBASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.4■■□□□ 1.34
SYNPOQ8N3V7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SYNPOQ8N3V7 ERN1-208ENST00000606895 2068 ntBASIC23.39■■□□□ 1.34
SYNPOQ8N3V7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.33
SYNPOQ8N3V7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYNPOQ8N3V7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.39■■□□□ 1.33
SYNPOQ8N3V7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYNPOQ8N3V7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYNPOQ8N3V7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
SYNPOQ8N3V7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms