Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.04■■□□□ 1.12
COL27A1Q8IZC6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL27A1Q8IZC6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.03■■□□□ 1.12
COL27A1Q8IZC6 AC091305.1-201ENST00000479476 895 ntBASIC22.03■■□□□ 1.12
COL27A1Q8IZC6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL27A1Q8IZC6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.03■■□□□ 1.12
COL27A1Q8IZC6 RASA4CP-201ENST00000424092 1398 ntBASIC22.03■■□□□ 1.12
COL27A1Q8IZC6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.02■■□□□ 1.12
COL27A1Q8IZC6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.02■■□□□ 1.11
COL27A1Q8IZC6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.01■■□□□ 1.11
COL27A1Q8IZC6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
COL27A1Q8IZC6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 AC027682.1-201ENST00000562846 899 ntBASIC22■■□□□ 1.11
COL27A1Q8IZC6 AC099791.2-201ENST00000605725 427 ntBASIC22■■□□□ 1.11
COL27A1Q8IZC6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL27A1Q8IZC6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
COL27A1Q8IZC6 SYT6-210ENST00000641643 1587 ntBASIC22■■□□□ 1.11
COL27A1Q8IZC6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
COL27A1Q8IZC6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL27A1Q8IZC6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 AC006455.2-201ENST00000429931 906 ntBASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL27A1Q8IZC6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.98■■□□□ 1.11
COL27A1Q8IZC6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 AC009102.2-201ENST00000606772 1639 ntBASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 SLC6A10P-202ENST00000431994 2058 ntBASIC21.97■■□□□ 1.11
COL27A1Q8IZC6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 AC099791.1-201ENST00000416440 715 ntBASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 AL162430.1-201ENST00000480705 870 ntBASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL27A1Q8IZC6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL27A1Q8IZC6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
COL27A1Q8IZC6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.95■■□□□ 1.1
COL27A1Q8IZC6 AL138724.1-201ENST00000606771 1088 ntBASIC21.95■■□□□ 1.1
COL27A1Q8IZC6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL27A1Q8IZC6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL27A1Q8IZC6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
COL27A1Q8IZC6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL27A1Q8IZC6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL27A1Q8IZC6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms