Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.82■■□□□ 1.08
RAB43Q86YS6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.82■■□□□ 1.08
RAB43Q86YS6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB43Q86YS6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.81■■□□□ 1.08
RAB43Q86YS6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.81■■□□□ 1.08
RAB43Q86YS6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB43Q86YS6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.81■■□□□ 1.08
RAB43Q86YS6 AL139246.5-201ENST00000606645 996 ntBASIC21.81■■□□□ 1.08
RAB43Q86YS6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB43Q86YS6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB43Q86YS6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB43Q86YS6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB43Q86YS6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB43Q86YS6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB43Q86YS6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB43Q86YS6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RAB43Q86YS6 SNX5-217ENST00000606557 1087 ntBASIC21.8■■□□□ 1.08
RAB43Q86YS6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.8■■□□□ 1.08
RAB43Q86YS6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RAB43Q86YS6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.79■■□□□ 1.08
RAB43Q86YS6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.79■■□□□ 1.08
RAB43Q86YS6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.79■■□□□ 1.08
RAB43Q86YS6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.79■■□□□ 1.08
RAB43Q86YS6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB43Q86YS6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB43Q86YS6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB43Q86YS6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 MIR6722-201ENST00000617286 78 ntBASIC21.78■■□□□ 1.08
RAB43Q86YS6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAB43Q86YS6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB43Q86YS6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAB43Q86YS6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB43Q86YS6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.77■■□□□ 1.08
RAB43Q86YS6 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.77■■□□□ 1.08
RAB43Q86YS6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB43Q86YS6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAB43Q86YS6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB43Q86YS6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RAB43Q86YS6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
RAB43Q86YS6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
RAB43Q86YS6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB43Q86YS6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB43Q86YS6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RAB43Q86YS6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RAB43Q86YS6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB43Q86YS6 AC133561.1-201ENST00000568600 2415 ntBASIC21.75■■□□□ 1.07
RAB43Q86YS6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RAB43Q86YS6 MIR638-201ENST00000385237 100 ntBASIC21.75■■□□□ 1.07
RAB43Q86YS6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.75■■□□□ 1.07
RAB43Q86YS6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB43Q86YS6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.75■■□□□ 1.07
RAB43Q86YS6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.75■■□□□ 1.07
RAB43Q86YS6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.75■■□□□ 1.07
RAB43Q86YS6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB43Q86YS6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB43Q86YS6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
RAB43Q86YS6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
RAB43Q86YS6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
RAB43Q86YS6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RAB43Q86YS6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB43Q86YS6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB43Q86YS6 AC092803.2-201ENST00000564287 1899 ntBASIC21.73■■□□□ 1.07
RAB43Q86YS6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.73■■□□□ 1.07
RAB43Q86YS6 MIR4466-201ENST00000606121 54 ntBASIC21.73■■□□□ 1.07
RAB43Q86YS6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB43Q86YS6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB43Q86YS6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RAB43Q86YS6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RAB43Q86YS6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB43Q86YS6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB43Q86YS6 AL512631.2-201ENST00000604634 923 ntBASIC21.72■■□□□ 1.07
RAB43Q86YS6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB43Q86YS6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB43Q86YS6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms