Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1LQ86WJ1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1LQ86WJ1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1LQ86WJ1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1LQ86WJ1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1LQ86WJ1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1LQ86WJ1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.5■■■□□ 2.15
CHD1LQ86WJ1 AL161729.1-201ENST00000604104 1402 ntBASIC28.5■■■□□ 2.15
CHD1LQ86WJ1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
CHD1LQ86WJ1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1LQ86WJ1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.49■■■□□ 2.15
CHD1LQ86WJ1 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.49■■■□□ 2.15
CHD1LQ86WJ1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1LQ86WJ1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1LQ86WJ1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.48■■■□□ 2.15
CHD1LQ86WJ1 AC010980.1-201ENST00000587192 1142 ntBASIC28.48■■■□□ 2.15
CHD1LQ86WJ1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CHD1LQ86WJ1 AC074183.2-201ENST00000623112 922 ntBASIC28.48■■■□□ 2.15
CHD1LQ86WJ1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.48■■■□□ 2.15
CHD1LQ86WJ1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CHD1LQ86WJ1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 AC120024.1-201ENST00000562672 995 ntBASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1LQ86WJ1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.45■■■□□ 2.15
CHD1LQ86WJ1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1LQ86WJ1 AC131274.2-201ENST00000580697 1507 ntBASIC28.45■■■□□ 2.15
CHD1LQ86WJ1 DUSP8P5-201ENST00000422884 1815 ntBASIC28.45■■■□□ 2.14
CHD1LQ86WJ1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.45■■■□□ 2.14
CHD1LQ86WJ1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.45■■■□□ 2.14
CHD1LQ86WJ1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.45■■■□□ 2.14
CHD1LQ86WJ1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 AC012354.3-201ENST00000623734 483 ntBASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1LQ86WJ1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.43■■■□□ 2.14
CHD1LQ86WJ1 AL022069.1-201ENST00000568025 1636 ntBASIC28.43■■■□□ 2.14
CHD1LQ86WJ1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CHD1LQ86WJ1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHD1LQ86WJ1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD1LQ86WJ1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 AL033527.3-201ENST00000566366 1196 ntBASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHD1LQ86WJ1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 KRT18P24-201ENST00000344739 1156 ntBASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHD1LQ86WJ1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC28.39■■■□□ 2.14
CHD1LQ86WJ1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CHD1LQ86WJ1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CHD1LQ86WJ1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CHD1LQ86WJ1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms