Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.62■■□□□ 1.21
LRRTM4Q86VH4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRTM4Q86VH4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.61■■□□□ 1.21
LRRTM4Q86VH4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRTM4Q86VH4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRRTM4Q86VH4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRTM4Q86VH4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.61■■□□□ 1.21
LRRTM4Q86VH4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 AC135731.1-201ENST00000569415 2548 ntBASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRTM4Q86VH4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRTM4Q86VH4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.59■■□□□ 1.21
LRRTM4Q86VH4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRTM4Q86VH4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LRRTM4Q86VH4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.59■■□□□ 1.21
LRRTM4Q86VH4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRTM4Q86VH4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRTM4Q86VH4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LRRTM4Q86VH4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
LRRTM4Q86VH4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
LRRTM4Q86VH4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
LRRTM4Q86VH4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 AL117332.1-201ENST00000622628 974 ntBASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM4Q86VH4 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM4Q86VH4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 AL356740.2-201ENST00000601559 647 ntBASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 AC005703.6-201ENST00000623265 1329 ntBASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM4Q86VH4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms