Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 AL022069.1-201ENST00000568025 1636 ntBASIC22.05■■□□□ 1.12
RNF44Q7L0R7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF44Q7L0R7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF44Q7L0R7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF44Q7L0R7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF44Q7L0R7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF44Q7L0R7 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.04■■□□□ 1.12
RNF44Q7L0R7 AC010997.5-201ENST00000609182 354 ntBASIC22.04■■□□□ 1.12
RNF44Q7L0R7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RNF44Q7L0R7 AL161729.1-201ENST00000604104 1402 ntBASIC22.04■■□□□ 1.12
RNF44Q7L0R7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF44Q7L0R7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF44Q7L0R7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 MIR6722-201ENST00000617286 78 ntBASIC22.02■■□□□ 1.12
RNF44Q7L0R7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF44Q7L0R7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF44Q7L0R7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF44Q7L0R7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22■■□□□ 1.11
RNF44Q7L0R7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF44Q7L0R7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22■■□□□ 1.11
RNF44Q7L0R7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF44Q7L0R7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF44Q7L0R7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF44Q7L0R7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22■■□□□ 1.11
RNF44Q7L0R7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF44Q7L0R7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22■■□□□ 1.11
RNF44Q7L0R7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22■■□□□ 1.11
RNF44Q7L0R7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RNF44Q7L0R7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF44Q7L0R7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RNF44Q7L0R7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF44Q7L0R7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 MIR6724-1-201ENST00000616420 92 ntBASIC21.97■■□□□ 1.11
RNF44Q7L0R7 MIR6724-2-201ENST00000616483 92 ntBASIC21.97■■□□□ 1.11
RNF44Q7L0R7 MIR6724-4-201ENST00000617390 92 ntBASIC21.97■■□□□ 1.11
RNF44Q7L0R7 MIR6724-3-201ENST00000622482 92 ntBASIC21.97■■□□□ 1.11
RNF44Q7L0R7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.97■■□□□ 1.11
RNF44Q7L0R7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms