Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.85■□□□□ 0.77
COLCA1Q6ZS62 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COLCA1Q6ZS62 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.83■□□□□ 0.77
COLCA1Q6ZS62 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.83■□□□□ 0.77
COLCA1Q6ZS62 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.83■□□□□ 0.77
COLCA1Q6ZS62 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COLCA1Q6ZS62 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COLCA1Q6ZS62 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COLCA1Q6ZS62 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COLCA1Q6ZS62 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COLCA1Q6ZS62 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COLCA1Q6ZS62 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 AC004448.1-201ENST00000458332 883 ntBASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COLCA1Q6ZS62 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.81■□□□□ 0.76
COLCA1Q6ZS62 RARRES2P1-201ENST00000474487 481 ntBASIC19.81■□□□□ 0.76
COLCA1Q6ZS62 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COLCA1Q6ZS62 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA1Q6ZS62 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 ALDH1A3-203ENST00000557963 1670 ntBASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA1Q6ZS62 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 AC021242.3-201ENST00000607598 1377 ntBASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COLCA1Q6ZS62 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COLCA1Q6ZS62 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
COLCA1Q6ZS62 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms