Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ATP5G2P3-201ENST00000429083 425 ntBASIC26.05■■□□□ 1.76
SHC4Q6S5L8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.05■■□□□ 1.76
SHC4Q6S5L8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
SHC4Q6S5L8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.05■■□□□ 1.76
SHC4Q6S5L8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
SHC4Q6S5L8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SHC4Q6S5L8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SHC4Q6S5L8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 AC139795.1-202ENST00000500444 432 ntBASIC26.04■■□□□ 1.76
SHC4Q6S5L8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 AC011551.1-201ENST00000614101 683 ntBASIC26.04■■□□□ 1.76
SHC4Q6S5L8 PVT1_1.1-201ENST00000615125 194 ntBASIC26.04■■□□□ 1.76
SHC4Q6S5L8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.04■■□□□ 1.76
SHC4Q6S5L8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
SHC4Q6S5L8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SHC4Q6S5L8 AC068473.5-201ENST00000616428 2072 ntBASIC26.02■■□□□ 1.76
SHC4Q6S5L8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SHC4Q6S5L8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SHC4Q6S5L8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
SHC4Q6S5L8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
SHC4Q6S5L8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.01■■□□□ 1.75
SHC4Q6S5L8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SHC4Q6S5L8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SHC4Q6S5L8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SHC4Q6S5L8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26■■□□□ 1.75
SHC4Q6S5L8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SHC4Q6S5L8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SHC4Q6S5L8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26■■□□□ 1.75
SHC4Q6S5L8 NFE2L3P1-201ENST00000588207 1959 ntBASIC26■■□□□ 1.75
SHC4Q6S5L8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 AC131274.2-201ENST00000580697 1507 ntBASIC25.99■■□□□ 1.75
SHC4Q6S5L8 AL161729.1-201ENST00000604104 1402 ntBASIC25.99■■□□□ 1.75
SHC4Q6S5L8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHC4Q6S5L8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHC4Q6S5L8 AC022616.5-201ENST00000518796 181 ntBASIC25.98■■□□□ 1.75
SHC4Q6S5L8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHC4Q6S5L8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHC4Q6S5L8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.98■■□□□ 1.75
SHC4Q6S5L8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.98■■□□□ 1.75
SHC4Q6S5L8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHC4Q6S5L8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.97■■□□□ 1.75
SHC4Q6S5L8 C9orf163-202ENST00000624034 2573 ntBASIC25.97■■□□□ 1.75
SHC4Q6S5L8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.96■■□□□ 1.75
SHC4Q6S5L8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SHC4Q6S5L8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.96■■□□□ 1.75
SHC4Q6S5L8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHC4Q6S5L8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.96■■□□□ 1.75
SHC4Q6S5L8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHC4Q6S5L8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.95■■□□□ 1.75
SHC4Q6S5L8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHC4Q6S5L8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHC4Q6S5L8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.95■■□□□ 1.74
SHC4Q6S5L8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.95■■□□□ 1.74
SHC4Q6S5L8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.95■■□□□ 1.74
SHC4Q6S5L8 AL022069.1-201ENST00000568025 1636 ntBASIC25.95■■□□□ 1.74
SHC4Q6S5L8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
SHC4Q6S5L8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 TSPY13P-201ENST00000338964 914 ntBASIC25.94■■□□□ 1.74
SHC4Q6S5L8 AC120024.1-201ENST00000562672 995 ntBASIC25.94■■□□□ 1.74
SHC4Q6S5L8 AC010980.1-201ENST00000587192 1142 ntBASIC25.94■■□□□ 1.74
SHC4Q6S5L8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 BHLHE23-202ENST00000612929 1109 ntBASIC25.94■■□□□ 1.74
SHC4Q6S5L8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHC4Q6S5L8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms