Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C11orf88Q6PI97 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C11orf88Q6PI97 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C11orf88Q6PI97 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
C11orf88Q6PI97 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C11orf88Q6PI97 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C11orf88Q6PI97 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 C9orf163-202ENST00000624034 2573 ntBASIC19.8■□□□□ 0.76
C11orf88Q6PI97 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C11orf88Q6PI97 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C11orf88Q6PI97 AL359258.2-201ENST00000564063 1566 ntBASIC19.78■□□□□ 0.76
C11orf88Q6PI97 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.78■□□□□ 0.76
C11orf88Q6PI97 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 AL117328.2-201ENST00000624617 1940 ntBASIC19.77■□□□□ 0.76
C11orf88Q6PI97 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.77■□□□□ 0.76
C11orf88Q6PI97 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C11orf88Q6PI97 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.77■□□□□ 0.75
C11orf88Q6PI97 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
C11orf88Q6PI97 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf88Q6PI97 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf88Q6PI97 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.73■□□□□ 0.75
C11orf88Q6PI97 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms