Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USH1GQ495M9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.54■■□□□ 1.84
USH1GQ495M9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
USH1GQ495M9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USH1GQ495M9 MIR4466-201ENST00000606121 54 ntBASIC26.54■■□□□ 1.84
USH1GQ495M9 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.54■■□□□ 1.84
USH1GQ495M9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
USH1GQ495M9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USH1GQ495M9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
USH1GQ495M9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.53■■□□□ 1.84
USH1GQ495M9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USH1GQ495M9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USH1GQ495M9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
USH1GQ495M9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.53■■□□□ 1.84
USH1GQ495M9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USH1GQ495M9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USH1GQ495M9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
USH1GQ495M9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
USH1GQ495M9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.52■■□□□ 1.84
USH1GQ495M9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
USH1GQ495M9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USH1GQ495M9 AL512631.2-201ENST00000604634 923 ntBASIC26.52■■□□□ 1.84
USH1GQ495M9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.52■■□□□ 1.84
USH1GQ495M9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
USH1GQ495M9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
USH1GQ495M9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.51■■□□□ 1.83
USH1GQ495M9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
USH1GQ495M9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
USH1GQ495M9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.51■■□□□ 1.83
USH1GQ495M9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
USH1GQ495M9 AL022069.1-201ENST00000568025 1636 ntBASIC26.5■■□□□ 1.83
USH1GQ495M9 AC020928.2-201ENST00000588717 2197 ntBASIC26.5■■□□□ 1.83
USH1GQ495M9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.5■■□□□ 1.83
USH1GQ495M9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.5■■□□□ 1.83
USH1GQ495M9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.5■■□□□ 1.83
USH1GQ495M9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.5■■□□□ 1.83
USH1GQ495M9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.5■■□□□ 1.83
USH1GQ495M9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
USH1GQ495M9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
USH1GQ495M9 AC135731.1-201ENST00000569415 2548 ntBASIC26.49■■□□□ 1.83
USH1GQ495M9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.49■■□□□ 1.83
USH1GQ495M9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
USH1GQ495M9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
USH1GQ495M9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
USH1GQ495M9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
USH1GQ495M9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.48■■□□□ 1.83
USH1GQ495M9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.48■■□□□ 1.83
USH1GQ495M9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.48■■□□□ 1.83
USH1GQ495M9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
USH1GQ495M9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
USH1GQ495M9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
USH1GQ495M9 AC138932.3-201ENST00000567634 1902 ntBASIC26.47■■□□□ 1.83
USH1GQ495M9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.47■■□□□ 1.83
USH1GQ495M9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
USH1GQ495M9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
USH1GQ495M9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
USH1GQ495M9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
USH1GQ495M9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
USH1GQ495M9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
USH1GQ495M9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
USH1GQ495M9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
USH1GQ495M9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
USH1GQ495M9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
USH1GQ495M9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.46■■□□□ 1.83
USH1GQ495M9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
USH1GQ495M9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
USH1GQ495M9 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.46■■□□□ 1.83
USH1GQ495M9 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.46■■□□□ 1.83
USH1GQ495M9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
USH1GQ495M9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.45■■□□□ 1.82
USH1GQ495M9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.45■■□□□ 1.82
USH1GQ495M9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
USH1GQ495M9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
USH1GQ495M9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
USH1GQ495M9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
USH1GQ495M9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
USH1GQ495M9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
USH1GQ495M9 AC005703.6-201ENST00000623265 1329 ntBASIC26.44■■□□□ 1.82
USH1GQ495M9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
USH1GQ495M9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.44■■□□□ 1.82
USH1GQ495M9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
USH1GQ495M9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
USH1GQ495M9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.43■■□□□ 1.82
USH1GQ495M9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
USH1GQ495M9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
USH1GQ495M9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.43■■□□□ 1.82
USH1GQ495M9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
USH1GQ495M9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
USH1GQ495M9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
USH1GQ495M9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
USH1GQ495M9 AP003733.4-201ENST00000623785 1697 ntBASIC26.42■■□□□ 1.82
USH1GQ495M9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.42■■□□□ 1.82
USH1GQ495M9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms