Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
CCDC144BQ3MJ40 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
CCDC144BQ3MJ40 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC144BQ3MJ40 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.7■■□□□ 1.86
CCDC144BQ3MJ40 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC144BQ3MJ40 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC144BQ3MJ40 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC144BQ3MJ40 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 AL356740.2-201ENST00000601559 647 ntBASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC144BQ3MJ40 AF131216.4-201ENST00000638924 1588 ntBASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC144BQ3MJ40 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 AC096887.2-201ENST00000623443 1957 ntBASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
CCDC144BQ3MJ40 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 MIR4466-201ENST00000606121 54 ntBASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC144BQ3MJ40 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.64■■□□□ 1.86
CCDC144BQ3MJ40 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.64■■□□□ 1.86
CCDC144BQ3MJ40 FOXO3B-201ENST00000395675 1928 ntBASIC26.64■■□□□ 1.86
CCDC144BQ3MJ40 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.64■■□□□ 1.85
CCDC144BQ3MJ40 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 AC110285.6-201ENST00000617652 491 ntBASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC144BQ3MJ40 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC144BQ3MJ40 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC144BQ3MJ40 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC144BQ3MJ40 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.62■■□□□ 1.85
CCDC144BQ3MJ40 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC144BQ3MJ40 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC144BQ3MJ40 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC144BQ3MJ40 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC144BQ3MJ40 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC144BQ3MJ40 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC144BQ3MJ40 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC144BQ3MJ40 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC144BQ3MJ40 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC144BQ3MJ40 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC144BQ3MJ40 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.58■■□□□ 1.85
CCDC144BQ3MJ40 AC096631.2-201ENST00000436136 790 ntBASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms