Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.02■□□□□ 0.48
CFHR3Q02985 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CFHR3Q02985 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CFHR3Q02985 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CFHR3Q02985 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.01■□□□□ 0.47
CFHR3Q02985 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CFHR3Q02985 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFHR3Q02985 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18■□□□□ 0.47
CFHR3Q02985 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CFHR3Q02985 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18■□□□□ 0.47
CFHR3Q02985 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18■□□□□ 0.47
CFHR3Q02985 MIR6724-1-201ENST00000616420 92 ntBASIC18■□□□□ 0.47
CFHR3Q02985 MIR6724-2-201ENST00000616483 92 ntBASIC18■□□□□ 0.47
CFHR3Q02985 MIR6724-4-201ENST00000617390 92 ntBASIC18■□□□□ 0.47
CFHR3Q02985 MIR6724-3-201ENST00000622482 92 ntBASIC18■□□□□ 0.47
CFHR3Q02985 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CFHR3Q02985 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CFHR3Q02985 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFHR3Q02985 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
CFHR3Q02985 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.99■□□□□ 0.47
CFHR3Q02985 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFHR3Q02985 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.99■□□□□ 0.47
CFHR3Q02985 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.99■□□□□ 0.47
CFHR3Q02985 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.99■□□□□ 0.47
CFHR3Q02985 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CFHR3Q02985 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CFHR3Q02985 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CFHR3Q02985 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.99■□□□□ 0.47
CFHR3Q02985 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CFHR3Q02985 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CFHR3Q02985 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.98■□□□□ 0.47
CFHR3Q02985 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.98■□□□□ 0.47
CFHR3Q02985 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFHR3Q02985 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
CFHR3Q02985 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFHR3Q02985 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFHR3Q02985 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.97■□□□□ 0.47
CFHR3Q02985 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.97■□□□□ 0.47
CFHR3Q02985 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.97■□□□□ 0.47
CFHR3Q02985 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.97■□□□□ 0.47
CFHR3Q02985 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.97■□□□□ 0.47
CFHR3Q02985 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFHR3Q02985 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.97■□□□□ 0.47
CFHR3Q02985 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFHR3Q02985 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFHR3Q02985 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CFHR3Q02985 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFHR3Q02985 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CFHR3Q02985 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.96■□□□□ 0.47
CFHR3Q02985 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.96■□□□□ 0.47
CFHR3Q02985 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CFHR3Q02985 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.96■□□□□ 0.47
CFHR3Q02985 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CFHR3Q02985 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CFHR3Q02985 AC131212.1-201ENST00000613771 668 ntBASIC17.96■□□□□ 0.47
CFHR3Q02985 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CFHR3Q02985 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CFHR3Q02985 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CFHR3Q02985 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.96■□□□□ 0.47
CFHR3Q02985 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
CFHR3Q02985 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.96■□□□□ 0.47
CFHR3Q02985 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFHR3Q02985 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFHR3Q02985 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFHR3Q02985 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFHR3Q02985 AL117332.1-201ENST00000622628 974 ntBASIC17.95■□□□□ 0.46
CFHR3Q02985 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CFHR3Q02985 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFHR3Q02985 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.95■□□□□ 0.46
CFHR3Q02985 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFHR3Q02985 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CFHR3Q02985 AC135731.1-201ENST00000569415 2548 ntBASIC17.94■□□□□ 0.46
CFHR3Q02985 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFHR3Q02985 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFHR3Q02985 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFHR3Q02985 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CFHR3Q02985 AL139125.2-201ENST00000623134 1869 ntBASIC17.93■□□□□ 0.46
CFHR3Q02985 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms