Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.89■□□□□ 0.93
SIRPAP78324 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.89■□□□□ 0.93
SIRPAP78324 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIRPAP78324 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIRPAP78324 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SIRPAP78324 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
SIRPAP78324 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SIRPAP78324 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.88■□□□□ 0.93
SIRPAP78324 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.88■□□□□ 0.93
SIRPAP78324 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.88■□□□□ 0.93
SIRPAP78324 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SIRPAP78324 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.88■□□□□ 0.93
SIRPAP78324 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.88■□□□□ 0.93
SIRPAP78324 AC131212.1-201ENST00000613771 668 ntBASIC20.88■□□□□ 0.93
SIRPAP78324 AC011551.1-201ENST00000614101 683 ntBASIC20.88■□□□□ 0.93
SIRPAP78324 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.88■□□□□ 0.93
SIRPAP78324 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.88■□□□□ 0.93
SIRPAP78324 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIRPAP78324 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIRPAP78324 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SIRPAP78324 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SIRPAP78324 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIRPAP78324 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIRPAP78324 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.87■□□□□ 0.93
SIRPAP78324 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.87■□□□□ 0.93
SIRPAP78324 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIRPAP78324 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIRPAP78324 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIRPAP78324 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.86■□□□□ 0.93
SIRPAP78324 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.86■□□□□ 0.93
SIRPAP78324 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIRPAP78324 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIRPAP78324 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.86■□□□□ 0.93
SIRPAP78324 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.86■□□□□ 0.93
SIRPAP78324 AL356441.2-201ENST00000443009 864 ntBASIC20.86■□□□□ 0.93
SIRPAP78324 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.86■□□□□ 0.93
SIRPAP78324 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.86■□□□□ 0.93
SIRPAP78324 AC137630.3-201ENST00000607245 391 ntBASIC20.86■□□□□ 0.93
SIRPAP78324 AC133561.1-201ENST00000568600 2415 ntBASIC20.86■□□□□ 0.93
SIRPAP78324 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIRPAP78324 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SIRPAP78324 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 TSPY9P-201ENST00000440215 945 ntBASIC20.85■□□□□ 0.93
SIRPAP78324 TSPY11P-201ENST00000442607 1045 ntBASIC20.85■□□□□ 0.93
SIRPAP78324 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.85■□□□□ 0.93
SIRPAP78324 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
SIRPAP78324 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIRPAP78324 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIRPAP78324 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SIRPAP78324 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SIRPAP78324 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.84■□□□□ 0.93
SIRPAP78324 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIRPAP78324 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIRPAP78324 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIRPAP78324 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIRPAP78324 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.83■□□□□ 0.93
SIRPAP78324 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.83■□□□□ 0.93
SIRPAP78324 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SIRPAP78324 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIRPAP78324 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.83■□□□□ 0.93
SIRPAP78324 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SIRPAP78324 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIRPAP78324 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.83■□□□□ 0.92
SIRPAP78324 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIRPAP78324 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SIRPAP78324 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SIRPAP78324 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.83■□□□□ 0.92
SIRPAP78324 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SIRPAP78324 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.83■□□□□ 0.92
SIRPAP78324 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIRPAP78324 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SIRPAP78324 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SIRPAP78324 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIRPAP78324 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.82■□□□□ 0.92
SIRPAP78324 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.82■□□□□ 0.92
SIRPAP78324 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIRPAP78324 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.82■□□□□ 0.92
SIRPAP78324 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIRPAP78324 AC012676.1-201ENST00000574705 1949 ntBASIC20.82■□□□□ 0.92
SIRPAP78324 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIRPAP78324 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms