Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.98■□□□□ 0.95
CXCR4P61073 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXCR4P61073 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXCR4P61073 GUSBP5-202ENST00000510805 1989 ntBASIC20.97■□□□□ 0.95
CXCR4P61073 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 C1orf229-201ENST00000623686 2258 ntBASIC20.97■□□□□ 0.95
CXCR4P61073 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CXCR4P61073 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.97■□□□□ 0.95
CXCR4P61073 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CXCR4P61073 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXCR4P61073 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.97■□□□□ 0.95
CXCR4P61073 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.96■□□□□ 0.95
CXCR4P61073 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXCR4P61073 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CXCR4P61073 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXCR4P61073 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.95■□□□□ 0.94
CXCR4P61073 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CXCR4P61073 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CXCR4P61073 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.95■□□□□ 0.94
CXCR4P61073 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXCR4P61073 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CXCR4P61073 AC025884.2-201ENST00000553429 711 ntBASIC20.95■□□□□ 0.94
CXCR4P61073 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.95■□□□□ 0.94
CXCR4P61073 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXCR4P61073 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXCR4P61073 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXCR4P61073 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.94■□□□□ 0.94
CXCR4P61073 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.94■□□□□ 0.94
CXCR4P61073 MIR3960-201ENST00000583311 91 ntBASIC20.94■□□□□ 0.94
CXCR4P61073 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXCR4P61073 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
CXCR4P61073 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXCR4P61073 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXCR4P61073 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXCR4P61073 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.94■□□□□ 0.94
CXCR4P61073 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXCR4P61073 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CXCR4P61073 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.93■□□□□ 0.94
CXCR4P61073 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.93■□□□□ 0.94
CXCR4P61073 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXCR4P61073 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXCR4P61073 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CXCR4P61073 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CXCR4P61073 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CXCR4P61073 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 AC060814.1-201ENST00000554326 538 ntBASIC20.92■□□□□ 0.94
CXCR4P61073 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCR4P61073 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.91■□□□□ 0.94
CXCR4P61073 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CXCR4P61073 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CXCR4P61073 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CXCR4P61073 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.9■□□□□ 0.94
CXCR4P61073 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCR4P61073 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CXCR4P61073 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCR4P61073 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCR4P61073 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.9■□□□□ 0.94
CXCR4P61073 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.9■□□□□ 0.94
CXCR4P61073 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CXCR4P61073 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CXCR4P61073 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CXCR4P61073 SMPD5-203ENST00000639008 1464 ntBASIC20.89■□□□□ 0.94
CXCR4P61073 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CXCR4P61073 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CXCR4P61073 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCR4P61073 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CXCR4P61073 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.88■□□□□ 0.93
CXCR4P61073 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CXCR4P61073 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CXCR4P61073 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CXCR4P61073 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CXCR4P61073 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.88■□□□□ 0.93
CXCR4P61073 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.88■□□□□ 0.93
CXCR4P61073 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CXCR4P61073 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms