Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN5P54829 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
PTPN5P54829 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.84■■□□□ 1.41
PTPN5P54829 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN5P54829 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN5P54829 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.83■■□□□ 1.41
PTPN5P54829 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN5P54829 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.83■■□□□ 1.41
PTPN5P54829 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.83■■□□□ 1.41
PTPN5P54829 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN5P54829 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.82■■□□□ 1.4
PTPN5P54829 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
PTPN5P54829 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN5P54829 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.82■■□□□ 1.4
PTPN5P54829 AC097639.1-201ENST00000565519 1891 ntBASIC23.81■■□□□ 1.4
PTPN5P54829 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN5P54829 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPN5P54829 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PTPN5P54829 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PTPN5P54829 AC027682.1-201ENST00000562846 899 ntBASIC23.81■■□□□ 1.4
PTPN5P54829 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN5P54829 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN5P54829 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPN5P54829 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN5P54829 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PTPN5P54829 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN5P54829 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PTPN5P54829 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN5P54829 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PTPN5P54829 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN5P54829 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN5P54829 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PTPN5P54829 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPN5P54829 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
PTPN5P54829 MIR6722-201ENST00000617286 78 ntBASIC23.79■■□□□ 1.4
PTPN5P54829 AC092437.1-201ENST00000624794 1048 ntBASIC23.79■■□□□ 1.4
PTPN5P54829 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.79■■□□□ 1.4
PTPN5P54829 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPN5P54829 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN5P54829 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PTPN5P54829 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN5P54829 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN5P54829 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN5P54829 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN5P54829 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPN5P54829 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPN5P54829 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
PTPN5P54829 MIR4767-201ENST00000582827 78 ntBASIC23.78■■□□□ 1.4
PTPN5P54829 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPN5P54829 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
PTPN5P54829 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN5P54829 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN5P54829 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN5P54829 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN5P54829 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.76■■□□□ 1.39
PTPN5P54829 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PTPN5P54829 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN5P54829 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN5P54829 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
PTPN5P54829 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPN5P54829 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN5P54829 KRT18P5-201ENST00000436075 1291 ntBASIC23.75■■□□□ 1.39
PTPN5P54829 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPN5P54829 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN5P54829 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PTPN5P54829 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN5P54829 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN5P54829 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN5P54829 SYT6-210ENST00000641643 1587 ntBASIC23.74■■□□□ 1.39
PTPN5P54829 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PTPN5P54829 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN5P54829 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN5P54829 AC004911.1-201ENST00000416316 871 ntBASIC23.74■■□□□ 1.39
PTPN5P54829 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.74■■□□□ 1.39
PTPN5P54829 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PTPN5P54829 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.74■■□□□ 1.39
PTPN5P54829 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.74■■□□□ 1.39
PTPN5P54829 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN5P54829 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN5P54829 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN5P54829 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN5P54829 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.73■■□□□ 1.39
PTPN5P54829 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN5P54829 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PTPN5P54829 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.73■■□□□ 1.39
PTPN5P54829 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN5P54829 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.73■■□□□ 1.39
PTPN5P54829 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PTPN5P54829 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN5P54829 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN5P54829 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.73■■□□□ 1.39
PTPN5P54829 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN5P54829 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.72■■□□□ 1.39
PTPN5P54829 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.72■■□□□ 1.39
PTPN5P54829 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.72■■□□□ 1.39
PTPN5P54829 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN5P54829 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN5P54829 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.72■■□□□ 1.39
PTPN5P54829 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN5P54829 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms