Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPT1AP50416 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.76■■□□□ 1.71
CPT1AP50416 AF213884.3-201ENST00000563833 479 ntBASIC25.76■■□□□ 1.71
CPT1AP50416 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.76■■□□□ 1.71
CPT1AP50416 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
CPT1AP50416 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.76■■□□□ 1.71
CPT1AP50416 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPT1AP50416 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CPT1AP50416 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.76■■□□□ 1.71
CPT1AP50416 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPT1AP50416 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CPT1AP50416 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.75■■□□□ 1.71
CPT1AP50416 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.75■■□□□ 1.71
CPT1AP50416 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
CPT1AP50416 MIR939-201ENST00000401314 82 ntBASIC25.75■■□□□ 1.71
CPT1AP50416 AL022069.1-201ENST00000568025 1636 ntBASIC25.74■■□□□ 1.71
CPT1AP50416 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CPT1AP50416 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CPT1AP50416 AC105265.2-201ENST00000467189 838 ntBASIC25.74■■□□□ 1.71
CPT1AP50416 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CPT1AP50416 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.74■■□□□ 1.71
CPT1AP50416 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.73■■□□□ 1.71
CPT1AP50416 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.73■■□□□ 1.71
CPT1AP50416 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CPT1AP50416 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CPT1AP50416 AP001330.3-201ENST00000520123 633 ntBASIC25.73■■□□□ 1.71
CPT1AP50416 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CPT1AP50416 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.73■■□□□ 1.71
CPT1AP50416 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.72■■□□□ 1.71
CPT1AP50416 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CPT1AP50416 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CPT1AP50416 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CPT1AP50416 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CPT1AP50416 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CPT1AP50416 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CPT1AP50416 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CPT1AP50416 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.71■■□□□ 1.71
CPT1AP50416 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.71■■□□□ 1.71
CPT1AP50416 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.71■■□□□ 1.71
CPT1AP50416 AC026271.2-201ENST00000428091 497 ntBASIC25.71■■□□□ 1.71
CPT1AP50416 AC091305.1-201ENST00000479476 895 ntBASIC25.71■■□□□ 1.71
CPT1AP50416 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CPT1AP50416 MIR4767-201ENST00000582827 78 ntBASIC25.71■■□□□ 1.71
CPT1AP50416 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
CPT1AP50416 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CPT1AP50416 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.7■■□□□ 1.71
CPT1AP50416 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CPT1AP50416 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CPT1AP50416 DUSP8P4-201ENST00000399538 1761 ntBASIC25.7■■□□□ 1.7
CPT1AP50416 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPT1AP50416 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.7■■□□□ 1.7
CPT1AP50416 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.7■■□□□ 1.7
CPT1AP50416 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.7■■□□□ 1.7
CPT1AP50416 SERBP1P1-201ENST00000396021 1160 ntBASIC25.69■■□□□ 1.7
CPT1AP50416 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.69■■□□□ 1.7
CPT1AP50416 AC099791.2-201ENST00000605725 427 ntBASIC25.69■■□□□ 1.7
CPT1AP50416 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.69■■□□□ 1.7
CPT1AP50416 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.68■■□□□ 1.7
CPT1AP50416 AC009102.2-201ENST00000606772 1639 ntBASIC25.68■■□□□ 1.7
CPT1AP50416 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPT1AP50416 AL138724.1-201ENST00000606771 1088 ntBASIC25.68■■□□□ 1.7
CPT1AP50416 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.68■■□□□ 1.7
CPT1AP50416 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPT1AP50416 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CPT1AP50416 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPT1AP50416 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.67■■□□□ 1.7
CPT1AP50416 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPT1AP50416 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPT1AP50416 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPT1AP50416 MIR5787-201ENST00000611784 55 ntBASIC25.67■■□□□ 1.7
CPT1AP50416 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CPT1AP50416 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPT1AP50416 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPT1AP50416 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.66■■□□□ 1.7
CPT1AP50416 AC011298.3-201ENST00000615796 283 ntBASIC25.66■■□□□ 1.7
CPT1AP50416 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CPT1AP50416 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPT1AP50416 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.66■■□□□ 1.7
CPT1AP50416 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPT1AP50416 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPT1AP50416 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPT1AP50416 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPT1AP50416 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.65■■□□□ 1.7
CPT1AP50416 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPT1AP50416 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPT1AP50416 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.65■■□□□ 1.7
CPT1AP50416 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPT1AP50416 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.65■■□□□ 1.7
CPT1AP50416 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.64■■□□□ 1.7
CPT1AP50416 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.64■■□□□ 1.7
CPT1AP50416 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
CPT1AP50416 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CPT1AP50416 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CPT1AP50416 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.64■■□□□ 1.69
CPT1AP50416 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.63■■□□□ 1.69
CPT1AP50416 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.63■■□□□ 1.69
CPT1AP50416 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPT1AP50416 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.63■■□□□ 1.69
CPT1AP50416 AC027682.1-201ENST00000562846 899 ntBASIC25.63■■□□□ 1.69
CPT1AP50416 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms