Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSR2P43308 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SSR2P43308 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSR2P43308 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SSR2P43308 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSR2P43308 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSR2P43308 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
SSR2P43308 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSR2P43308 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSR2P43308 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSR2P43308 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSR2P43308 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.89■■□□□ 1.09
SSR2P43308 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.89■■□□□ 1.09
SSR2P43308 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SSR2P43308 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSR2P43308 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
SSR2P43308 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SSR2P43308 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SSR2P43308 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.88■■□□□ 1.09
SSR2P43308 AC131274.2-201ENST00000580697 1507 ntBASIC21.88■■□□□ 1.09
SSR2P43308 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
SSR2P43308 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSR2P43308 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSR2P43308 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.88■■□□□ 1.09
SSR2P43308 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSR2P43308 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.87■■□□□ 1.09
SSR2P43308 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.87■■□□□ 1.09
SSR2P43308 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SSR2P43308 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.87■■□□□ 1.09
SSR2P43308 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSR2P43308 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SSR2P43308 ABCB10P4-201ENST00000566803 2184 ntBASIC21.87■■□□□ 1.09
SSR2P43308 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SSR2P43308 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSR2P43308 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSR2P43308 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSR2P43308 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSR2P43308 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SSR2P43308 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSR2P43308 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSR2P43308 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
SSR2P43308 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSR2P43308 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSR2P43308 AC137630.3-201ENST00000607245 391 ntBASIC21.85■■□□□ 1.09
SSR2P43308 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.85■■□□□ 1.09
SSR2P43308 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSR2P43308 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSR2P43308 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSR2P43308 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSR2P43308 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.84■■□□□ 1.09
SSR2P43308 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSR2P43308 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.84■■□□□ 1.09
SSR2P43308 BX664725.1-201ENST00000438252 379 ntBASIC21.84■■□□□ 1.09
SSR2P43308 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SSR2P43308 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSR2P43308 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SSR2P43308 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.84■■□□□ 1.09
SSR2P43308 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSR2P43308 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SSR2P43308 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.83■■□□□ 1.09
SSR2P43308 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSR2P43308 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.83■■□□□ 1.09
SSR2P43308 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSR2P43308 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SSR2P43308 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSR2P43308 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.83■■□□□ 1.09
SSR2P43308 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SSR2P43308 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.82■■□□□ 1.08
SSR2P43308 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SSR2P43308 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SSR2P43308 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSR2P43308 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSR2P43308 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.82■■□□□ 1.08
SSR2P43308 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SSR2P43308 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SSR2P43308 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SSR2P43308 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSR2P43308 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSR2P43308 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.81■■□□□ 1.08
SSR2P43308 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSR2P43308 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SSR2P43308 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSR2P43308 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSR2P43308 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSR2P43308 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.8■■□□□ 1.08
SSR2P43308 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.8■■□□□ 1.08
SSR2P43308 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.8■■□□□ 1.08
SSR2P43308 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSR2P43308 AL451085.2-201ENST00000605085 799 ntBASIC21.8■■□□□ 1.08
SSR2P43308 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSR2P43308 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.8■■□□□ 1.08
SSR2P43308 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.79■■□□□ 1.08
SSR2P43308 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.79■■□□□ 1.08
SSR2P43308 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.79■■□□□ 1.08
SSR2P43308 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SSR2P43308 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SSR2P43308 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SSR2P43308 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.79■■□□□ 1.08
SSR2P43308 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms