Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.07■■□□□ 1.44
SCNN1AP37088 SNX5-217ENST00000606557 1087 ntBASIC24.07■■□□□ 1.44
SCNN1AP37088 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SCNN1AP37088 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SCNN1AP37088 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCNN1AP37088 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.06■■□□□ 1.44
SCNN1AP37088 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SCNN1AP37088 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.06■■□□□ 1.44
SCNN1AP37088 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCNN1AP37088 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCNN1AP37088 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCNN1AP37088 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.05■■□□□ 1.44
SCNN1AP37088 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCNN1AP37088 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.05■■□□□ 1.44
SCNN1AP37088 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SCNN1AP37088 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCNN1AP37088 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.05■■□□□ 1.44
SCNN1AP37088 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCNN1AP37088 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SCNN1AP37088 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.04■■□□□ 1.44
SCNN1AP37088 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SCNN1AP37088 KRT125P-201ENST00000546827 989 ntBASIC24.04■■□□□ 1.44
SCNN1AP37088 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.04■■□□□ 1.44
SCNN1AP37088 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SCNN1AP37088 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCNN1AP37088 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.03■■□□□ 1.44
SCNN1AP37088 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCNN1AP37088 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCNN1AP37088 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCNN1AP37088 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SCNN1AP37088 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
SCNN1AP37088 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCNN1AP37088 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.03■■□□□ 1.44
SCNN1AP37088 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.02■■□□□ 1.44
SCNN1AP37088 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCNN1AP37088 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCNN1AP37088 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.02■■□□□ 1.44
SCNN1AP37088 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.02■■□□□ 1.44
SCNN1AP37088 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.02■■□□□ 1.44
SCNN1AP37088 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCNN1AP37088 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCNN1AP37088 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SCNN1AP37088 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SCNN1AP37088 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCNN1AP37088 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SCNN1AP37088 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SCNN1AP37088 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SCNN1AP37088 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SCNN1AP37088 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCNN1AP37088 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.01■■□□□ 1.43
SCNN1AP37088 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.01■■□□□ 1.43
SCNN1AP37088 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SCNN1AP37088 ALDH1A3-203ENST00000557963 1670 ntBASIC24.01■■□□□ 1.43
SCNN1AP37088 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SCNN1AP37088 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SCNN1AP37088 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24■■□□□ 1.43
SCNN1AP37088 AC092028.1-203ENST00000608262 953 ntBASIC24■■□□□ 1.43
SCNN1AP37088 MIR6722-201ENST00000617286 78 ntBASIC24■■□□□ 1.43
SCNN1AP37088 AL035685.1-201ENST00000636663 812 ntBASIC24■■□□□ 1.43
SCNN1AP37088 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24■■□□□ 1.43
SCNN1AP37088 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCNN1AP37088 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24■■□□□ 1.43
SCNN1AP37088 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCNN1AP37088 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCNN1AP37088 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCNN1AP37088 AC239859.2-201ENST00000444165 318 ntBASIC23.99■■□□□ 1.43
SCNN1AP37088 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.99■■□□□ 1.43
SCNN1AP37088 MIR4787-201ENST00000607364 84 ntBASIC23.99■■□□□ 1.43
SCNN1AP37088 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.98■■□□□ 1.43
SCNN1AP37088 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SCNN1AP37088 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
SCNN1AP37088 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.98■■□□□ 1.43
SCNN1AP37088 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCNN1AP37088 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SCNN1AP37088 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.97■■□□□ 1.43
SCNN1AP37088 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.97■■□□□ 1.43
SCNN1AP37088 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCNN1AP37088 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.97■■□□□ 1.43
SCNN1AP37088 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.97■■□□□ 1.43
SCNN1AP37088 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCNN1AP37088 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCNN1AP37088 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCNN1AP37088 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms