Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
RFC4P35249 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RFC4P35249 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RFC4P35249 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RFC4P35249 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
RFC4P35249 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
RFC4P35249 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.26■■■□□ 2.28
RFC4P35249 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.26■■■□□ 2.27
RFC4P35249 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.26■■■□□ 2.27
RFC4P35249 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RFC4P35249 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.26■■■□□ 2.27
RFC4P35249 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RFC4P35249 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RFC4P35249 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RFC4P35249 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.25■■■□□ 2.27
RFC4P35249 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.25■■■□□ 2.27
RFC4P35249 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RFC4P35249 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.25■■■□□ 2.27
RFC4P35249 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RFC4P35249 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RFC4P35249 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.24■■■□□ 2.27
RFC4P35249 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.24■■■□□ 2.27
RFC4P35249 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.24■■■□□ 2.27
RFC4P35249 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RFC4P35249 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
RFC4P35249 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RFC4P35249 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RFC4P35249 AC136469.2-201ENST00000623944 1028 ntBASIC29.23■■■□□ 2.27
RFC4P35249 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RFC4P35249 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RFC4P35249 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RFC4P35249 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RFC4P35249 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RFC4P35249 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.22■■■□□ 2.27
RFC4P35249 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.22■■■□□ 2.27
RFC4P35249 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RFC4P35249 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
RFC4P35249 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RFC4P35249 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.21■■■□□ 2.27
RFC4P35249 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.21■■■□□ 2.27
RFC4P35249 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
RFC4P35249 AC241377.3-202ENST00000626088 1088 ntBASIC29.21■■■□□ 2.27
RFC4P35249 AC241585.3-202ENST00000628937 1088 ntBASIC29.21■■■□□ 2.27
RFC4P35249 AC245100.8-202ENST00000629247 1058 ntBASIC29.21■■■□□ 2.27
RFC4P35249 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.21■■■□□ 2.27
RFC4P35249 AC010501.1-201ENST00000606270 1962 ntBASIC29.21■■■□□ 2.27
RFC4P35249 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
RFC4P35249 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
RFC4P35249 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.2■■■□□ 2.27
RFC4P35249 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
RFC4P35249 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.2■■■□□ 2.26
RFC4P35249 AC233992.3-201ENST00000607491 485 ntBASIC29.2■■■□□ 2.26
RFC4P35249 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RFC4P35249 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RFC4P35249 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.19■■■□□ 2.26
RFC4P35249 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
RFC4P35249 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.19■■■□□ 2.26
RFC4P35249 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
RFC4P35249 C17orf82-201ENST00000623772 1530 ntBASIC29.19■■■□□ 2.26
RFC4P35249 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
RFC4P35249 AC090192.1-201ENST00000517740 490 ntBASIC29.18■■■□□ 2.26
RFC4P35249 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.18■■■□□ 2.26
RFC4P35249 RARRES2P11-201ENST00000635158 484 ntBASIC29.18■■■□□ 2.26
RFC4P35249 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RFC4P35249 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.17■■■□□ 2.26
RFC4P35249 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
RFC4P35249 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
RFC4P35249 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
RFC4P35249 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.17■■■□□ 2.26
RFC4P35249 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.17■■■□□ 2.26
RFC4P35249 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RFC4P35249 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
RFC4P35249 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RFC4P35249 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
RFC4P35249 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.16■■■□□ 2.26
RFC4P35249 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RFC4P35249 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RFC4P35249 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
RFC4P35249 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
RFC4P35249 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.16■■■□□ 2.26
RFC4P35249 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.16■■■□□ 2.26
RFC4P35249 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RFC4P35249 BX842568.3-201ENST00000418104 571 ntBASIC29.15■■■□□ 2.26
RFC4P35249 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.15■■■□□ 2.26
RFC4P35249 AC034268.1-201ENST00000441047 882 ntBASIC29.15■■■□□ 2.26
RFC4P35249 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RFC4P35249 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.14■■■□□ 2.26
RFC4P35249 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 AC006455.2-201ENST00000429931 906 ntBASIC29.14■■■□□ 2.26
RFC4P35249 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.14■■■□□ 2.26
RFC4P35249 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.14■■■□□ 2.26
RFC4P35249 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RFC4P35249 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
RFC4P35249 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
RFC4P35249 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms