Protein–RNA interactions for Protein: P34741

SDC2, Syndecan-2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2P34741 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDC2P34741 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SDC2P34741 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDC2P34741 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SDC2P34741 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SDC2P34741 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.34■□□□□ 0.85
SDC2P34741 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.34■□□□□ 0.85
SDC2P34741 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SDC2P34741 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDC2P34741 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDC2P34741 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.34■□□□□ 0.85
SDC2P34741 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SDC2P34741 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDC2P34741 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SDC2P34741 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDC2P34741 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SDC2P34741 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.33■□□□□ 0.85
SDC2P34741 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SDC2P34741 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDC2P34741 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDC2P34741 HLA-V-202ENST00000446817 847 ntBASIC20.33■□□□□ 0.85
SDC2P34741 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.33■□□□□ 0.85
SDC2P34741 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDC2P34741 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.33■□□□□ 0.84
SDC2P34741 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDC2P34741 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDC2P34741 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.32■□□□□ 0.84
SDC2P34741 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SDC2P34741 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SDC2P34741 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SDC2P34741 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 AL162393.1-201ENST00000437852 946 ntBASIC20.32■□□□□ 0.84
SDC2P34741 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SDC2P34741 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.32■□□□□ 0.84
SDC2P34741 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 LINC00526-201ENST00000581067 1875 ntBASIC20.32■□□□□ 0.84
SDC2P34741 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDC2P34741 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 LINC01971-201ENST00000617888 1048 ntBASIC20.31■□□□□ 0.84
SDC2P34741 ANOS2P-203ENST00000472227 1816 ntBASIC20.31■□□□□ 0.84
SDC2P34741 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
SDC2P34741 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDC2P34741 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDC2P34741 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDC2P34741 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.3■□□□□ 0.84
SDC2P34741 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDC2P34741 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDC2P34741 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDC2P34741 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SDC2P34741 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.29■□□□□ 0.84
SDC2P34741 AC127496.7-201ENST00000625110 1798 ntBASIC20.29■□□□□ 0.84
SDC2P34741 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.29■□□□□ 0.84
SDC2P34741 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.29■□□□□ 0.84
SDC2P34741 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
SDC2P34741 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDC2P34741 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SDC2P34741 AC137767.1-201ENST00000602918 1920 ntBASIC20.28■□□□□ 0.84
SDC2P34741 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.28■□□□□ 0.84
SDC2P34741 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDC2P34741 GUSBP5-202ENST00000510805 1989 ntBASIC20.28■□□□□ 0.84
SDC2P34741 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDC2P34741 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDC2P34741 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDC2P34741 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.28■□□□□ 0.84
SDC2P34741 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDC2P34741 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SDC2P34741 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDC2P34741 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDC2P34741 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SDC2P34741 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDC2P34741 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDC2P34741 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SDC2P34741 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SDC2P34741 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SDC2P34741 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.26■□□□□ 0.83
SDC2P34741 DUSP8P3-201ENST00000399571 1760 ntBASIC20.26■□□□□ 0.83
SDC2P34741 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDC2P34741 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms