Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.86■□□□□ 0.29
CKS2P33552 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.85■□□□□ 0.29
CKS2P33552 AP006261.1-201ENST00000584783 668 ntBASIC16.85■□□□□ 0.29
CKS2P33552 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.85■□□□□ 0.29
CKS2P33552 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CKS2P33552 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS2P33552 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CKS2P33552 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.85■□□□□ 0.29
CKS2P33552 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CKS2P33552 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CKS2P33552 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.84■□□□□ 0.29
CKS2P33552 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 AC044849.2-201ENST00000606596 710 ntBASIC16.84■□□□□ 0.29
CKS2P33552 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.84■□□□□ 0.29
CKS2P33552 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 AC087741.3-201ENST00000624270 1347 ntBASIC16.84■□□□□ 0.29
CKS2P33552 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.84■□□□□ 0.29
CKS2P33552 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS2P33552 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKS2P33552 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKS2P33552 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CKS2P33552 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CKS2P33552 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CKS2P33552 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS2P33552 DUX4L29-201ENST00000425409 679 ntBASIC16.82■□□□□ 0.28
CKS2P33552 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.82■□□□□ 0.28
CKS2P33552 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS2P33552 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS2P33552 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS2P33552 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKS2P33552 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS2P33552 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS2P33552 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CKS2P33552 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CKS2P33552 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CKS2P33552 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.81■□□□□ 0.28
CKS2P33552 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.81■□□□□ 0.28
CKS2P33552 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS2P33552 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CKS2P33552 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CKS2P33552 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CKS2P33552 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKS2P33552 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CKS2P33552 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.79■□□□□ 0.28
CKS2P33552 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.79■□□□□ 0.28
CKS2P33552 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS2P33552 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CKS2P33552 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CKS2P33552 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.78■□□□□ 0.28
CKS2P33552 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms