Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.17■□□□□ 0.98
PRKCAP17252 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKCAP17252 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKCAP17252 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRKCAP17252 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRKCAP17252 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRKCAP17252 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKCAP17252 AC103724.3-201ENST00000564481 992 ntBASIC21.16■□□□□ 0.98
PRKCAP17252 THA1P-201ENST00000590384 1145 ntBASIC21.16■□□□□ 0.98
PRKCAP17252 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKCAP17252 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRKCAP17252 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
PRKCAP17252 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKCAP17252 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.15■□□□□ 0.98
PRKCAP17252 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKCAP17252 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
PRKCAP17252 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.15■□□□□ 0.98
PRKCAP17252 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.14■□□□□ 0.98
PRKCAP17252 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.14■□□□□ 0.97
PRKCAP17252 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.14■□□□□ 0.97
PRKCAP17252 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.14■□□□□ 0.97
PRKCAP17252 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PRKCAP17252 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRKCAP17252 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKCAP17252 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKCAP17252 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKCAP17252 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.13■□□□□ 0.97
PRKCAP17252 RARRES2P1-201ENST00000474487 481 ntBASIC21.13■□□□□ 0.97
PRKCAP17252 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKCAP17252 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.13■□□□□ 0.97
PRKCAP17252 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKCAP17252 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRKCAP17252 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.12■□□□□ 0.97
PRKCAP17252 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRKCAP17252 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRKCAP17252 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.12■□□□□ 0.97
PRKCAP17252 HLA-L-211ENST00000482052 1765 ntBASIC21.12■□□□□ 0.97
PRKCAP17252 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRKCAP17252 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRKCAP17252 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRKCAP17252 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PRKCAP17252 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRKCAP17252 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.11■□□□□ 0.97
PRKCAP17252 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PRKCAP17252 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRKCAP17252 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
PRKCAP17252 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRKCAP17252 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.1■□□□□ 0.97
PRKCAP17252 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.1■□□□□ 0.97
PRKCAP17252 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRKCAP17252 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.1■□□□□ 0.97
PRKCAP17252 MIR4281-201ENST00000580852 62 ntBASIC21.1■□□□□ 0.97
PRKCAP17252 AL031848.2-201ENST00000607670 837 ntBASIC21.1■□□□□ 0.97
PRKCAP17252 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 AC068473.5-201ENST00000616428 2072 ntBASIC21.09■□□□□ 0.97
PRKCAP17252 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.09■□□□□ 0.97
PRKCAP17252 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRKCAP17252 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.08■□□□□ 0.97
PRKCAP17252 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRKCAP17252 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
PRKCAP17252 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRKCAP17252 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRKCAP17252 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRKCAP17252 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.07■□□□□ 0.96
PRKCAP17252 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRKCAP17252 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRKCAP17252 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRKCAP17252 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRKCAP17252 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRKCAP17252 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
PRKCAP17252 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRKCAP17252 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRKCAP17252 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRKCAP17252 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.05■□□□□ 0.96
PRKCAP17252 LINC01124-201ENST00000409786 2117 ntBASIC21.05■□□□□ 0.96
PRKCAP17252 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRKCAP17252 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.05■□□□□ 0.96
PRKCAP17252 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRKCAP17252 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRKCAP17252 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.04■□□□□ 0.96
PRKCAP17252 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.04■□□□□ 0.96
PRKCAP17252 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms