Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.16■■□□□ 1.46
RARAP10276 AC074183.2-201ENST00000623112 922 ntBASIC24.16■■□□□ 1.46
RARAP10276 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RARAP10276 DUSP8P5-201ENST00000422884 1815 ntBASIC24.16■■□□□ 1.46
RARAP10276 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RARAP10276 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RARAP10276 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.16■■□□□ 1.46
RARAP10276 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.16■■□□□ 1.46
RARAP10276 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.16■■□□□ 1.46
RARAP10276 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.15■■□□□ 1.46
RARAP10276 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RARAP10276 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RARAP10276 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RARAP10276 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RARAP10276 AC010980.1-201ENST00000587192 1142 ntBASIC24.15■■□□□ 1.46
RARAP10276 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.15■■□□□ 1.46
RARAP10276 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RARAP10276 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.15■■□□□ 1.46
RARAP10276 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RARAP10276 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
RARAP10276 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RARAP10276 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RARAP10276 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.14■■□□□ 1.45
RARAP10276 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.14■■□□□ 1.45
RARAP10276 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.14■■□□□ 1.45
RARAP10276 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RARAP10276 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RARAP10276 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.13■■□□□ 1.45
RARAP10276 AC022616.5-201ENST00000518796 181 ntBASIC24.13■■□□□ 1.45
RARAP10276 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.13■■□□□ 1.45
RARAP10276 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RARAP10276 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.12■■□□□ 1.45
RARAP10276 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.12■■□□□ 1.45
RARAP10276 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.12■■□□□ 1.45
RARAP10276 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.12■■□□□ 1.45
RARAP10276 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RARAP10276 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RARAP10276 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RARAP10276 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RARAP10276 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
RARAP10276 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RARAP10276 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RARAP10276 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RARAP10276 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.11■■□□□ 1.45
RARAP10276 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.11■■□□□ 1.45
RARAP10276 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.11■■□□□ 1.45
RARAP10276 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RARAP10276 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
RARAP10276 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
RARAP10276 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RARAP10276 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.1■■□□□ 1.45
RARAP10276 AC011551.1-201ENST00000614101 683 ntBASIC24.1■■□□□ 1.45
RARAP10276 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.1■■□□□ 1.45
RARAP10276 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RARAP10276 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RARAP10276 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RARAP10276 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RARAP10276 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RARAP10276 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.09■■□□□ 1.45
RARAP10276 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RARAP10276 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RARAP10276 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
RARAP10276 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
RARAP10276 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RARAP10276 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RARAP10276 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RARAP10276 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RARAP10276 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RARAP10276 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RARAP10276 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
RARAP10276 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.08■■□□□ 1.45
RARAP10276 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RARAP10276 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RARAP10276 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RARAP10276 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.07■■□□□ 1.44
RARAP10276 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.07■■□□□ 1.44
RARAP10276 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.07■■□□□ 1.44
RARAP10276 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RARAP10276 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.06■■□□□ 1.44
RARAP10276 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RARAP10276 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RARAP10276 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.06■■□□□ 1.44
RARAP10276 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RARAP10276 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RARAP10276 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.06■■□□□ 1.44
RARAP10276 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.05■■□□□ 1.44
RARAP10276 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.05■■□□□ 1.44
RARAP10276 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.05■■□□□ 1.44
RARAP10276 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
RARAP10276 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.04■■□□□ 1.44
RARAP10276 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.04■■□□□ 1.44
RARAP10276 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.04■■□□□ 1.44
RARAP10276 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RARAP10276 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RARAP10276 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RARAP10276 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.04■■□□□ 1.44
RARAP10276 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.04■■□□□ 1.44
RARAP10276 AC120024.1-201ENST00000562672 995 ntBASIC24.04■■□□□ 1.44
RARAP10276 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.04■■□□□ 1.44
RARAP10276 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms