Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBCP0CG48 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.1■□□□□ 0.81
UBCP0CG48 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBCP0CG48 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
UBCP0CG48 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
UBCP0CG48 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.09■□□□□ 0.81
UBCP0CG48 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBCP0CG48 AL592295.1-201ENST00000400984 884 ntBASIC20.09■□□□□ 0.81
UBCP0CG48 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UBCP0CG48 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.09■□□□□ 0.81
UBCP0CG48 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBCP0CG48 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
UBCP0CG48 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.09■□□□□ 0.81
UBCP0CG48 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBCP0CG48 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBCP0CG48 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
UBCP0CG48 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBCP0CG48 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBCP0CG48 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBCP0CG48 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBCP0CG48 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBCP0CG48 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBCP0CG48 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBCP0CG48 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
UBCP0CG48 AL592293.1-201ENST00000502889 1188 ntBASIC20.08■□□□□ 0.81
UBCP0CG48 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBCP0CG48 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.8
UBCP0CG48 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
UBCP0CG48 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBCP0CG48 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBCP0CG48 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBCP0CG48 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBCP0CG48 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBCP0CG48 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBCP0CG48 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBCP0CG48 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.07■□□□□ 0.8
UBCP0CG48 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBCP0CG48 AC087393.1-201ENST00000582896 145 ntBASIC20.07■□□□□ 0.8
UBCP0CG48 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBCP0CG48 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.06■□□□□ 0.8
UBCP0CG48 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBCP0CG48 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBCP0CG48 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBCP0CG48 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.06■□□□□ 0.8
UBCP0CG48 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBCP0CG48 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
UBCP0CG48 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.05■□□□□ 0.8
UBCP0CG48 MIR6765-201ENST00000614092 87 ntBASIC20.05■□□□□ 0.8
UBCP0CG48 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBCP0CG48 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
UBCP0CG48 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 SPCS2P3-201ENST00000500401 656 ntBASIC20.04■□□□□ 0.8
UBCP0CG48 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.04■□□□□ 0.8
UBCP0CG48 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBCP0CG48 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
UBCP0CG48 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.03■□□□□ 0.8
UBCP0CG48 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UBCP0CG48 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
UBCP0CG48 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBCP0CG48 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.02■□□□□ 0.8
UBCP0CG48 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBCP0CG48 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
UBCP0CG48 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBCP0CG48 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBCP0CG48 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBCP0CG48 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBCP0CG48 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
UBCP0CG48 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
UBCP0CG48 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.01■□□□□ 0.79
UBCP0CG48 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBCP0CG48 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBCP0CG48 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBCP0CG48 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBCP0CG48 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBCP0CG48 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms