Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 AC133552.2-201ENST00000619106 1032 ntBASIC20.55■□□□□ 0.88
MRPL3P09001 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
MRPL3P09001 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
MRPL3P09001 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MRPL3P09001 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL3P09001 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL3P09001 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL3P09001 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MRPL3P09001 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.54■□□□□ 0.88
MRPL3P09001 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.54■□□□□ 0.88
MRPL3P09001 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL3P09001 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL3P09001 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL3P09001 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MRPL3P09001 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.53■□□□□ 0.88
MRPL3P09001 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL3P09001 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MRPL3P09001 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
MRPL3P09001 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MRPL3P09001 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MRPL3P09001 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL3P09001 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.52■□□□□ 0.88
MRPL3P09001 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MRPL3P09001 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MRPL3P09001 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MRPL3P09001 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRPL3P09001 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL3P09001 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MRPL3P09001 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.51■□□□□ 0.87
MRPL3P09001 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL3P09001 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL3P09001 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MRPL3P09001 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL3P09001 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MRPL3P09001 MIR4449-201ENST00000578365 66 ntBASIC20.51■□□□□ 0.87
MRPL3P09001 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.51■□□□□ 0.87
MRPL3P09001 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.51■□□□□ 0.87
MRPL3P09001 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL3P09001 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
MRPL3P09001 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MRPL3P09001 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MRPL3P09001 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 AC079834.2-201ENST00000609776 1949 ntBASIC20.5■□□□□ 0.87
MRPL3P09001 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MRPL3P09001 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL3P09001 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MRPL3P09001 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MRPL3P09001 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MRPL3P09001 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.49■□□□□ 0.87
MRPL3P09001 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL3P09001 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.49■□□□□ 0.87
MRPL3P09001 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL3P09001 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL3P09001 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.48■□□□□ 0.87
MRPL3P09001 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL3P09001 RPS2P7-201ENST00000447334 885 ntBASIC20.48■□□□□ 0.87
MRPL3P09001 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.48■□□□□ 0.87
MRPL3P09001 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL3P09001 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL3P09001 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.48■□□□□ 0.87
MRPL3P09001 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
MRPL3P09001 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
MRPL3P09001 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
MRPL3P09001 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MRPL3P09001 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL3P09001 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms