Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.82■■■□□ 2.04
CHGBP05060 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHGBP05060 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHGBP05060 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
CHGBP05060 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.81■■■□□ 2.04
CHGBP05060 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHGBP05060 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.81■■■□□ 2.04
CHGBP05060 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CHGBP05060 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.81■■■□□ 2.04
CHGBP05060 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHGBP05060 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHGBP05060 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.81■■■□□ 2.04
CHGBP05060 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.81■■■□□ 2.04
CHGBP05060 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHGBP05060 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHGBP05060 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
CHGBP05060 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHGBP05060 AC004812.2-201ENST00000611079 2094 ntBASIC27.8■■■□□ 2.04
CHGBP05060 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHGBP05060 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHGBP05060 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHGBP05060 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHGBP05060 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHGBP05060 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHGBP05060 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CHGBP05060 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHGBP05060 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHGBP05060 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHGBP05060 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.78■■■□□ 2.04
CHGBP05060 AC004448.1-201ENST00000458332 883 ntBASIC27.78■■■□□ 2.04
CHGBP05060 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.78■■■□□ 2.04
CHGBP05060 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.78■■■□□ 2.04
CHGBP05060 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHGBP05060 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHGBP05060 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHGBP05060 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.77■■■□□ 2.04
CHGBP05060 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
CHGBP05060 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.04
CHGBP05060 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.76■■■□□ 2.04
CHGBP05060 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CHGBP05060 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.76■■■□□ 2.03
CHGBP05060 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.76■■■□□ 2.03
CHGBP05060 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.76■■■□□ 2.03
CHGBP05060 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.76■■■□□ 2.03
CHGBP05060 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHGBP05060 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.75■■■□□ 2.03
CHGBP05060 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.75■■■□□ 2.03
CHGBP05060 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHGBP05060 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
CHGBP05060 KRT16P3-201ENST00000439127 1283 ntBASIC27.75■■■□□ 2.03
CHGBP05060 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
CHGBP05060 AC010997.5-201ENST00000609182 354 ntBASIC27.75■■■□□ 2.03
CHGBP05060 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHGBP05060 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHGBP05060 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHGBP05060 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.74■■■□□ 2.03
CHGBP05060 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHGBP05060 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHGBP05060 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.74■■■□□ 2.03
CHGBP05060 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHGBP05060 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHGBP05060 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHGBP05060 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
CHGBP05060 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.73■■■□□ 2.03
CHGBP05060 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CHGBP05060 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHGBP05060 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
CHGBP05060 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
CHGBP05060 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHGBP05060 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.73■■■□□ 2.03
CHGBP05060 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHGBP05060 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.73■■■□□ 2.03
CHGBP05060 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHGBP05060 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHGBP05060 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHGBP05060 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.72■■■□□ 2.03
CHGBP05060 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
CHGBP05060 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHGBP05060 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHGBP05060 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.71■■■□□ 2.03
CHGBP05060 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHGBP05060 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHGBP05060 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.7■■■□□ 2.02
CHGBP05060 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27.7■■■□□ 2.02
CHGBP05060 MTDHP2-201ENST00000601468 714 ntBASIC27.7■■■□□ 2.02
CHGBP05060 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.7■■■□□ 2.02
CHGBP05060 AL022069.1-201ENST00000568025 1636 ntBASIC27.7■■■□□ 2.02
CHGBP05060 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
CHGBP05060 LINC00543-201ENST00000567234 1845 ntBASIC27.69■■■□□ 2.02
CHGBP05060 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.69■■■□□ 2.02
CHGBP05060 ABCB10P4-201ENST00000566803 2184 ntBASIC27.69■■■□□ 2.02
CHGBP05060 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CHGBP05060 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CHGBP05060 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.68■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms