Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
HLA-DQA2P01906 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA2P01906 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA2P01906 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DQA2P01906 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 KRT18P60-201ENST00000312876 1297 ntBASIC20.52■□□□□ 0.88
HLA-DQA2P01906 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA2P01906 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HLA-DQA2P01906 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
HLA-DQA2P01906 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HLA-DQA2P01906 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
HLA-DQA2P01906 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA2P01906 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.51■□□□□ 0.87
HLA-DQA2P01906 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.51■□□□□ 0.87
HLA-DQA2P01906 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DQA2P01906 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA2P01906 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DQA2P01906 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DQA2P01906 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA2P01906 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA2P01906 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 ABHD17AP5-201ENST00000580133 923 ntBASIC20.49■□□□□ 0.87
HLA-DQA2P01906 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA2P01906 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 AC139795.1-202ENST00000500444 432 ntBASIC20.48■□□□□ 0.87
HLA-DQA2P01906 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA2P01906 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 LONRF2P2-201ENST00000439212 571 ntBASIC20.47■□□□□ 0.87
HLA-DQA2P01906 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA2P01906 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 DUX4L18-201ENST00000553347 1267 ntBASIC20.46■□□□□ 0.87
HLA-DQA2P01906 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA2P01906 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQA2P01906 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DQA2P01906 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.44■□□□□ 0.86
HLA-DQA2P01906 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.44■□□□□ 0.86
HLA-DQA2P01906 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DQA2P01906 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DQA2P01906 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms