Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LTAP01374 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LTAP01374 SMPD5-203ENST00000639008 1464 ntBASIC17.31■□□□□ 0.36
LTAP01374 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LTAP01374 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LTAP01374 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LTAP01374 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 CR559946.2-201ENST00000623684 991 ntBASIC17.31■□□□□ 0.36
LTAP01374 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LTAP01374 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LTAP01374 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LTAP01374 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LTAP01374 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.31■□□□□ 0.36
LTAP01374 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LTAP01374 AC127496.7-201ENST00000625110 1798 ntBASIC17.3■□□□□ 0.36
LTAP01374 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LTAP01374 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LTAP01374 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LTAP01374 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
LTAP01374 GUSBP5-202ENST00000510805 1989 ntBASIC17.3■□□□□ 0.36
LTAP01374 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.3■□□□□ 0.36
LTAP01374 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
LTAP01374 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LTAP01374 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.3■□□□□ 0.36
LTAP01374 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LTAP01374 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LTAP01374 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.29■□□□□ 0.36
LTAP01374 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LTAP01374 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LTAP01374 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
LTAP01374 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LTAP01374 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LTAP01374 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.29■□□□□ 0.36
LTAP01374 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LTAP01374 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LTAP01374 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
LTAP01374 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.28■□□□□ 0.36
LTAP01374 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LTAP01374 KRT18P10-201ENST00000388836 1287 ntBASIC17.28■□□□□ 0.36
LTAP01374 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LTAP01374 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LTAP01374 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LTAP01374 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LTAP01374 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LTAP01374 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LTAP01374 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LTAP01374 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LTAP01374 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.27■□□□□ 0.36
LTAP01374 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LTAP01374 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LTAP01374 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LTAP01374 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LTAP01374 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
LTAP01374 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
LTAP01374 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LTAP01374 ECEL1P1-201ENST00000373592 1742 ntBASIC17.27■□□□□ 0.35
LTAP01374 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.26■□□□□ 0.35
LTAP01374 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.26■□□□□ 0.35
LTAP01374 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.26■□□□□ 0.35
LTAP01374 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 AC137767.1-201ENST00000602918 1920 ntBASIC17.26■□□□□ 0.35
LTAP01374 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.26■□□□□ 0.35
LTAP01374 ZNRF2P2-203ENST00000454624 420 ntBASIC17.26■□□□□ 0.35
LTAP01374 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.26■□□□□ 0.35
LTAP01374 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
LTAP01374 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LTAP01374 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.25■□□□□ 0.35
LTAP01374 AC060814.1-201ENST00000554326 538 ntBASIC17.25■□□□□ 0.35
LTAP01374 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.25■□□□□ 0.35
LTAP01374 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LTAP01374 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LTAP01374 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.24■□□□□ 0.35
LTAP01374 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms