Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL031602.1-201ENST00000633169 911 ntBASIC26.68■■□□□ 1.86
ALDH1A1P00352 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ALDH1A1P00352 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ALDH1A1P00352 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ALDH1A1P00352 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ALDH1A1P00352 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.67■■□□□ 1.86
ALDH1A1P00352 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ALDH1A1P00352 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ALDH1A1P00352 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ALDH1A1P00352 C17orf82-201ENST00000623772 1530 ntBASIC26.66■■□□□ 1.86
ALDH1A1P00352 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
ALDH1A1P00352 AC123595.1-201ENST00000440769 1046 ntBASIC26.66■■□□□ 1.86
ALDH1A1P00352 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.66■■□□□ 1.86
ALDH1A1P00352 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ALDH1A1P00352 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ALDH1A1P00352 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ALDH1A1P00352 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
ALDH1A1P00352 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
ALDH1A1P00352 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ALDH1A1P00352 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
ALDH1A1P00352 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ALDH1A1P00352 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
ALDH1A1P00352 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ALDH1A1P00352 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ALDH1A1P00352 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
ALDH1A1P00352 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
ALDH1A1P00352 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
ALDH1A1P00352 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
ALDH1A1P00352 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
ALDH1A1P00352 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.64■■□□□ 1.86
ALDH1A1P00352 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.64■■□□□ 1.86
ALDH1A1P00352 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.64■■□□□ 1.86
ALDH1A1P00352 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
ALDH1A1P00352 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
ALDH1A1P00352 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.64■■□□□ 1.85
ALDH1A1P00352 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.85
ALDH1A1P00352 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
ALDH1A1P00352 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ALDH1A1P00352 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ALDH1A1P00352 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ALDH1A1P00352 AC126544.1-201ENST00000580842 1059 ntBASIC26.63■■□□□ 1.85
ALDH1A1P00352 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.63■■□□□ 1.85
ALDH1A1P00352 AL358852.1-201ENST00000623174 1268 ntBASIC26.63■■□□□ 1.85
ALDH1A1P00352 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.63■■□□□ 1.85
ALDH1A1P00352 AC097639.1-201ENST00000565519 1891 ntBASIC26.63■■□□□ 1.85
ALDH1A1P00352 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.63■■□□□ 1.85
ALDH1A1P00352 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ALDH1A1P00352 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ALDH1A1P00352 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.62■■□□□ 1.85
ALDH1A1P00352 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.62■■□□□ 1.85
ALDH1A1P00352 AC027612.3-201ENST00000413684 1047 ntBASIC26.62■■□□□ 1.85
ALDH1A1P00352 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
ALDH1A1P00352 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
ALDH1A1P00352 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ALDH1A1P00352 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.62■■□□□ 1.85
ALDH1A1P00352 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
ALDH1A1P00352 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ALDH1A1P00352 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ALDH1A1P00352 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.61■■□□□ 1.85
ALDH1A1P00352 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.61■■□□□ 1.85
ALDH1A1P00352 MIR3181-201ENST00000578512 73 ntBASIC26.61■■□□□ 1.85
ALDH1A1P00352 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.61■■□□□ 1.85
ALDH1A1P00352 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.61■■□□□ 1.85
ALDH1A1P00352 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ALDH1A1P00352 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ALDH1A1P00352 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ALDH1A1P00352 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ALDH1A1P00352 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.6■■□□□ 1.85
ALDH1A1P00352 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
ALDH1A1P00352 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
ALDH1A1P00352 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ALDH1A1P00352 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.59■■□□□ 1.85
ALDH1A1P00352 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ALDH1A1P00352 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.59■■□□□ 1.85
ALDH1A1P00352 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
ALDH1A1P00352 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.59■■□□□ 1.85
ALDH1A1P00352 AC009086.3-201ENST00000623486 1008 ntBASIC26.59■■□□□ 1.85
ALDH1A1P00352 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
ALDH1A1P00352 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
ALDH1A1P00352 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ALDH1A1P00352 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ALDH1A1P00352 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ALDH1A1P00352 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ALDH1A1P00352 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ALDH1A1P00352 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.58■■□□□ 1.85
ALDH1A1P00352 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.58■■□□□ 1.85
ALDH1A1P00352 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.58■■□□□ 1.85
ALDH1A1P00352 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
ALDH1A1P00352 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ALDH1A1P00352 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.58■■□□□ 1.85
ALDH1A1P00352 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ALDH1A1P00352 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ALDH1A1P00352 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ALDH1A1P00352 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.57■■□□□ 1.84
ALDH1A1P00352 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.57■■□□□ 1.84
ALDH1A1P00352 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.57■■□□□ 1.84
ALDH1A1P00352 AC006455.2-201ENST00000429931 906 ntBASIC26.57■■□□□ 1.84
ALDH1A1P00352 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.57■■□□□ 1.84
ALDH1A1P00352 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.57■■□□□ 1.84
ALDH1A1P00352 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms