Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB3DO95716 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAB3DO95716 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RAB3DO95716 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB3DO95716 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB3DO95716 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3DO95716 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3DO95716 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3DO95716 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3DO95716 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3DO95716 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3DO95716 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RAB3DO95716 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB3DO95716 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3DO95716 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.46■□□□□ 0.71
RAB3DO95716 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3DO95716 C1orf229-201ENST00000623686 2258 ntBASIC19.46■□□□□ 0.71
RAB3DO95716 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB3DO95716 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3DO95716 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RAB3DO95716 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3DO95716 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3DO95716 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RAB3DO95716 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3DO95716 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3DO95716 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB3DO95716 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3DO95716 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB3DO95716 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3DO95716 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB3DO95716 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB3DO95716 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3DO95716 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3DO95716 LINC00526-201ENST00000581067 1875 ntBASIC19.44■□□□□ 0.7
RAB3DO95716 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB3DO95716 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAB3DO95716 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3DO95716 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3DO95716 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3DO95716 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 DUSP8P3-201ENST00000399571 1760 ntBASIC19.43■□□□□ 0.7
RAB3DO95716 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3DO95716 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RAB3DO95716 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB3DO95716 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3DO95716 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3DO95716 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3DO95716 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB3DO95716 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB3DO95716 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB3DO95716 GUSBP5-202ENST00000510805 1989 ntBASIC19.42■□□□□ 0.7
RAB3DO95716 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
RAB3DO95716 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB3DO95716 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB3DO95716 AC127496.7-201ENST00000625110 1798 ntBASIC19.42■□□□□ 0.7
RAB3DO95716 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3DO95716 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3DO95716 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB3DO95716 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3DO95716 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RAB3DO95716 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
RAB3DO95716 MIR3960-201ENST00000583311 91 ntBASIC19.41■□□□□ 0.7
RAB3DO95716 AC092068.2-201ENST00000590491 1708 ntBASIC19.41■□□□□ 0.7
RAB3DO95716 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RAB3DO95716 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3DO95716 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 1722.2 ms