Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSPG5O95196 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSPG5O95196 AC091305.1-201ENST00000479476 895 ntBASIC24.69■■□□□ 1.54
CSPG5O95196 AL162430.1-201ENST00000480705 870 ntBASIC24.69■■□□□ 1.54
CSPG5O95196 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSPG5O95196 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSPG5O95196 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CSPG5O95196 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 SERBP1P1-201ENST00000396021 1160 ntBASIC24.68■■□□□ 1.54
CSPG5O95196 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.68■■□□□ 1.54
CSPG5O95196 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.68■■□□□ 1.54
CSPG5O95196 AC008764.7-201ENST00000593779 1081 ntBASIC24.68■■□□□ 1.54
CSPG5O95196 AC099791.2-201ENST00000605725 427 ntBASIC24.68■■□□□ 1.54
CSPG5O95196 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSPG5O95196 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.67■■□□□ 1.54
CSPG5O95196 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.67■■□□□ 1.54
CSPG5O95196 CA15P2-201ENST00000611168 834 ntBASIC24.67■■□□□ 1.54
CSPG5O95196 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSPG5O95196 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.67■■□□□ 1.54
CSPG5O95196 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.66■■□□□ 1.54
CSPG5O95196 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSPG5O95196 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.66■■□□□ 1.54
CSPG5O95196 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
CSPG5O95196 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.66■■□□□ 1.54
CSPG5O95196 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSPG5O95196 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.66■■□□□ 1.54
CSPG5O95196 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CSPG5O95196 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CSPG5O95196 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CSPG5O95196 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSPG5O95196 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.65■■□□□ 1.54
CSPG5O95196 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.65■■□□□ 1.54
CSPG5O95196 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.65■■□□□ 1.54
CSPG5O95196 DUX4L19-201ENST00000557448 1267 ntBASIC24.65■■□□□ 1.54
CSPG5O95196 MIR6821-201ENST00000617625 74 ntBASIC24.65■■□□□ 1.54
CSPG5O95196 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSPG5O95196 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.64■■□□□ 1.54
CSPG5O95196 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CSPG5O95196 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.64■■□□□ 1.53
CSPG5O95196 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.64■■□□□ 1.53
CSPG5O95196 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CSPG5O95196 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CSPG5O95196 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSPG5O95196 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.63■■□□□ 1.53
CSPG5O95196 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSPG5O95196 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSPG5O95196 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSPG5O95196 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSPG5O95196 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSPG5O95196 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.62■■□□□ 1.53
CSPG5O95196 AC097381.1-201ENST00000429019 1296 ntBASIC24.62■■□□□ 1.53
CSPG5O95196 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.62■■□□□ 1.53
CSPG5O95196 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSPG5O95196 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSPG5O95196 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CSPG5O95196 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CSPG5O95196 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CSPG5O95196 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.61■■□□□ 1.53
CSPG5O95196 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CSPG5O95196 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CSPG5O95196 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSPG5O95196 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.61■■□□□ 1.53
CSPG5O95196 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSPG5O95196 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSPG5O95196 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.6■■□□□ 1.53
CSPG5O95196 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.6■■□□□ 1.53
CSPG5O95196 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSPG5O95196 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSPG5O95196 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.59■■□□□ 1.53
CSPG5O95196 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSPG5O95196 AC099791.1-201ENST00000416440 715 ntBASIC24.59■■□□□ 1.53
CSPG5O95196 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CSPG5O95196 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSPG5O95196 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSPG5O95196 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CSPG5O95196 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.59■■□□□ 1.53
CSPG5O95196 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.59■■□□□ 1.53
CSPG5O95196 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CSPG5O95196 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSPG5O95196 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CSPG5O95196 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.58■■□□□ 1.53
CSPG5O95196 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms