Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC242852.2-201ENST00000615738 1807 ntBASIC20.12■□□□□ 0.81
UPK1BO75841 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
UPK1BO75841 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
UPK1BO75841 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
UPK1BO75841 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1BO75841 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1BO75841 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.11■□□□□ 0.81
UPK1BO75841 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.11■□□□□ 0.81
UPK1BO75841 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UPK1BO75841 HLA-L-211ENST00000482052 1765 ntBASIC20.11■□□□□ 0.81
UPK1BO75841 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1BO75841 AC092068.2-201ENST00000590491 1708 ntBASIC20.1■□□□□ 0.81
UPK1BO75841 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1BO75841 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.1■□□□□ 0.81
UPK1BO75841 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1BO75841 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UPK1BO75841 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1BO75841 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1BO75841 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1BO75841 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
UPK1BO75841 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1BO75841 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UPK1BO75841 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1BO75841 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1BO75841 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1BO75841 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.09■□□□□ 0.81
UPK1BO75841 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UPK1BO75841 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.09■□□□□ 0.81
UPK1BO75841 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1BO75841 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1BO75841 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.08■□□□□ 0.81
UPK1BO75841 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
UPK1BO75841 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UPK1BO75841 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1BO75841 AC092667.1-201ENST00000434301 2586 ntBASIC20.08■□□□□ 0.8
UPK1BO75841 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1BO75841 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1BO75841 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1BO75841 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UPK1BO75841 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.07■□□□□ 0.8
UPK1BO75841 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1BO75841 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.07■□□□□ 0.8
UPK1BO75841 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.07■□□□□ 0.8
UPK1BO75841 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1BO75841 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UPK1BO75841 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1BO75841 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1BO75841 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
UPK1BO75841 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
UPK1BO75841 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPK1BO75841 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPK1BO75841 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPK1BO75841 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
UPK1BO75841 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPK1BO75841 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UPK1BO75841 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.06■□□□□ 0.8
UPK1BO75841 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPK1BO75841 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPK1BO75841 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPK1BO75841 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPK1BO75841 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UPK1BO75841 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPK1BO75841 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
UPK1BO75841 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
UPK1BO75841 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPK1BO75841 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPK1BO75841 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UPK1BO75841 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.04■□□□□ 0.8
UPK1BO75841 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.04■□□□□ 0.8
UPK1BO75841 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.04■□□□□ 0.8
UPK1BO75841 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPK1BO75841 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPK1BO75841 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UPK1BO75841 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPK1BO75841 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPK1BO75841 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK1BO75841 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPK1BO75841 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK1BO75841 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
UPK1BO75841 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.03■□□□□ 0.8
UPK1BO75841 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK1BO75841 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
UPK1BO75841 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms