Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.2■□□□□ 0.82
GMDSO60547 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.2■□□□□ 0.82
GMDSO60547 MIR6089-201ENST00000616698 64 ntBASIC20.2■□□□□ 0.82
GMDSO60547 AC141586.4-201ENST00000624558 1573 ntBASIC20.2■□□□□ 0.82
GMDSO60547 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GMDSO60547 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GMDSO60547 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.2■□□□□ 0.82
GMDSO60547 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GMDSO60547 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GMDSO60547 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GMDSO60547 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GMDSO60547 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GMDSO60547 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
GMDSO60547 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GMDSO60547 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GMDSO60547 FOXO3B-201ENST00000395675 1928 ntBASIC20.19■□□□□ 0.82
GMDSO60547 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.19■□□□□ 0.82
GMDSO60547 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GMDSO60547 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GMDSO60547 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GMDSO60547 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GMDSO60547 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GMDSO60547 ATP5G2P3-201ENST00000429083 425 ntBASIC20.18■□□□□ 0.82
GMDSO60547 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.18■□□□□ 0.82
GMDSO60547 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GMDSO60547 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GMDSO60547 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.18■□□□□ 0.82
GMDSO60547 AC012354.3-201ENST00000623734 483 ntBASIC20.18■□□□□ 0.82
GMDSO60547 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.18■□□□□ 0.82
GMDSO60547 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.18■□□□□ 0.82
GMDSO60547 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GMDSO60547 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.17■□□□□ 0.82
GMDSO60547 AC004812.2-201ENST00000611079 2094 ntBASIC20.17■□□□□ 0.82
GMDSO60547 TSPY13P-201ENST00000338964 914 ntBASIC20.17■□□□□ 0.82
GMDSO60547 AC004987.1-201ENST00000428627 508 ntBASIC20.17■□□□□ 0.82
GMDSO60547 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.17■□□□□ 0.82
GMDSO60547 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GMDSO60547 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.17■□□□□ 0.82
GMDSO60547 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.17■□□□□ 0.82
GMDSO60547 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
GMDSO60547 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.16■□□□□ 0.82
GMDSO60547 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 AC139795.1-202ENST00000500444 432 ntBASIC20.16■□□□□ 0.82
GMDSO60547 DUX4L18-201ENST00000553347 1267 ntBASIC20.16■□□□□ 0.82
GMDSO60547 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GMDSO60547 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GMDSO60547 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GMDSO60547 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.16■□□□□ 0.82
GMDSO60547 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.15■□□□□ 0.82
GMDSO60547 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.15■□□□□ 0.82
GMDSO60547 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GMDSO60547 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GMDSO60547 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GMDSO60547 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.15■□□□□ 0.82
GMDSO60547 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
GMDSO60547 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.14■□□□□ 0.82
GMDSO60547 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
GMDSO60547 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GMDSO60547 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GMDSO60547 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
GMDSO60547 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
GMDSO60547 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GMDSO60547 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GMDSO60547 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.14■□□□□ 0.81
GMDSO60547 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.14■□□□□ 0.81
GMDSO60547 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GMDSO60547 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.14■□□□□ 0.81
GMDSO60547 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
GMDSO60547 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GMDSO60547 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
GMDSO60547 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GMDSO60547 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.13■□□□□ 0.81
GMDSO60547 AC074183.2-201ENST00000623112 922 ntBASIC20.13■□□□□ 0.81
GMDSO60547 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GMDSO60547 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.13■□□□□ 0.81
GMDSO60547 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GMDSO60547 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GMDSO60547 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.13■□□□□ 0.81
GMDSO60547 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GMDSO60547 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GMDSO60547 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GMDSO60547 LONRF2P2-201ENST00000439212 571 ntBASIC20.12■□□□□ 0.81
GMDSO60547 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.12■□□□□ 0.81
GMDSO60547 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GMDSO60547 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GMDSO60547 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
GMDSO60547 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms