Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAF3IP2O43734 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 AC137630.3-201ENST00000607245 391 ntBASIC20.49■□□□□ 0.87
TRAF3IP2O43734 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP2O43734 ABCB10P4-201ENST00000566803 2184 ntBASIC20.48■□□□□ 0.87
TRAF3IP2O43734 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP2O43734 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP2O43734 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TRAF3IP2O43734 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP2O43734 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP2O43734 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP2O43734 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP2O43734 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRAF3IP2O43734 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP2O43734 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP2O43734 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRAF3IP2O43734 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 AL451085.2-201ENST00000605085 799 ntBASIC20.43■□□□□ 0.86
TRAF3IP2O43734 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP2O43734 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 AC004448.1-201ENST00000458332 883 ntBASIC20.42■□□□□ 0.86
TRAF3IP2O43734 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP2O43734 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAF3IP2O43734 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms