Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
FOXS1O43638 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXS1O43638 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXS1O43638 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXS1O43638 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXS1O43638 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXS1O43638 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXS1O43638 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXS1O43638 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXS1O43638 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
FOXS1O43638 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
FOXS1O43638 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXS1O43638 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXS1O43638 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.78■■□□□ 1.08
FOXS1O43638 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXS1O43638 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
FOXS1O43638 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXS1O43638 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXS1O43638 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
FOXS1O43638 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXS1O43638 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXS1O43638 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXS1O43638 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXS1O43638 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXS1O43638 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXS1O43638 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXS1O43638 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXS1O43638 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.76■■□□□ 1.07
FOXS1O43638 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FOXS1O43638 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.76■■□□□ 1.07
FOXS1O43638 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXS1O43638 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXS1O43638 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXS1O43638 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXS1O43638 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
FOXS1O43638 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.75■■□□□ 1.07
FOXS1O43638 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXS1O43638 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
FOXS1O43638 AL161729.1-201ENST00000604104 1402 ntBASIC21.74■■□□□ 1.07
FOXS1O43638 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXS1O43638 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXS1O43638 AL117332.1-201ENST00000622628 974 ntBASIC21.74■■□□□ 1.07
FOXS1O43638 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXS1O43638 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXS1O43638 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXS1O43638 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
FOXS1O43638 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.73■■□□□ 1.07
FOXS1O43638 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXS1O43638 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.73■■□□□ 1.07
FOXS1O43638 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.73■■□□□ 1.07
FOXS1O43638 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXS1O43638 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXS1O43638 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXS1O43638 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXS1O43638 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 AL139125.2-201ENST00000623134 1869 ntBASIC21.72■■□□□ 1.07
FOXS1O43638 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXS1O43638 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXS1O43638 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXS1O43638 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.71■■□□□ 1.07
FOXS1O43638 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXS1O43638 MIR3621-201ENST00000580529 85 ntBASIC21.71■■□□□ 1.07
FOXS1O43638 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
FOXS1O43638 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
FOXS1O43638 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXS1O43638 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXS1O43638 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXS1O43638 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXS1O43638 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXS1O43638 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXS1O43638 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXS1O43638 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXS1O43638 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.69■■□□□ 1.06
FOXS1O43638 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXS1O43638 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXS1O43638 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXS1O43638 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXS1O43638 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXS1O43638 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.68■■□□□ 1.06
FOXS1O43638 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
FOXS1O43638 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.68■■□□□ 1.06
FOXS1O43638 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms