Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 KRT8P33-201ENST00000508125 1423 ntBASIC20.21■□□□□ 0.83
SGCEO43556 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SGCEO43556 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SGCEO43556 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SGCEO43556 YBX1P4-201ENST00000392794 808 ntBASIC20.21■□□□□ 0.83
SGCEO43556 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.21■□□□□ 0.83
SGCEO43556 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SGCEO43556 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.21■□□□□ 0.83
SGCEO43556 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SGCEO43556 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.21■□□□□ 0.83
SGCEO43556 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.21■□□□□ 0.83
SGCEO43556 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SGCEO43556 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
SGCEO43556 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 AC004812.2-201ENST00000611079 2094 ntBASIC20.2■□□□□ 0.82
SGCEO43556 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SGCEO43556 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
SGCEO43556 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
SGCEO43556 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.19■□□□□ 0.82
SGCEO43556 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.19■□□□□ 0.82
SGCEO43556 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.19■□□□□ 0.82
SGCEO43556 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SGCEO43556 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SGCEO43556 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.18■□□□□ 0.82
SGCEO43556 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SGCEO43556 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SGCEO43556 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SGCEO43556 AC103834.1-201ENST00000520383 144 ntBASIC20.18■□□□□ 0.82
SGCEO43556 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SGCEO43556 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SGCEO43556 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SGCEO43556 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.18■□□□□ 0.82
SGCEO43556 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SGCEO43556 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.17■□□□□ 0.82
SGCEO43556 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.17■□□□□ 0.82
SGCEO43556 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SGCEO43556 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.16■□□□□ 0.82
SGCEO43556 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SGCEO43556 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SGCEO43556 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SGCEO43556 MIR4281-201ENST00000580852 62 ntBASIC20.16■□□□□ 0.82
SGCEO43556 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.16■□□□□ 0.82
SGCEO43556 AL161729.1-201ENST00000604104 1402 ntBASIC20.16■□□□□ 0.82
SGCEO43556 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SGCEO43556 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SGCEO43556 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SGCEO43556 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SGCEO43556 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SGCEO43556 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SGCEO43556 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.15■□□□□ 0.82
SGCEO43556 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
SGCEO43556 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SGCEO43556 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SGCEO43556 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
SGCEO43556 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 AL022069.1-201ENST00000568025 1636 ntBASIC20.14■□□□□ 0.81
SGCEO43556 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SGCEO43556 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.14■□□□□ 0.81
SGCEO43556 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SGCEO43556 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SGCEO43556 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SGCEO43556 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SGCEO43556 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SGCEO43556 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SGCEO43556 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.13■□□□□ 0.81
SGCEO43556 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SGCEO43556 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.13■□□□□ 0.81
SGCEO43556 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms