Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 UNC93B8-201ENST00000511903 705 ntBASIC19.71■□□□□ 0.75
PHF1O43189 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PHF1O43189 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PHF1O43189 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.7■□□□□ 0.74
PHF1O43189 AP003733.4-201ENST00000623785 1697 ntBASIC19.7■□□□□ 0.74
PHF1O43189 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF1O43189 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHF1O43189 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.69■□□□□ 0.74
PHF1O43189 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PHF1O43189 AC022616.5-201ENST00000518796 181 ntBASIC19.69■□□□□ 0.74
PHF1O43189 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.69■□□□□ 0.74
PHF1O43189 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.69■□□□□ 0.74
PHF1O43189 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF1O43189 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PHF1O43189 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.68■□□□□ 0.74
PHF1O43189 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF1O43189 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PHF1O43189 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF1O43189 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF1O43189 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF1O43189 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF1O43189 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.67■□□□□ 0.74
PHF1O43189 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF1O43189 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PHF1O43189 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF1O43189 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PHF1O43189 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF1O43189 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
PHF1O43189 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF1O43189 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 AC092666.2-201ENST00000613287 246 ntBASIC19.66■□□□□ 0.74
PHF1O43189 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF1O43189 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF1O43189 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF1O43189 AC133561.1-201ENST00000568600 2415 ntBASIC19.65■□□□□ 0.74
PHF1O43189 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF1O43189 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PHF1O43189 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.65■□□□□ 0.74
PHF1O43189 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.65■□□□□ 0.74
PHF1O43189 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.65■□□□□ 0.74
PHF1O43189 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.65■□□□□ 0.74
PHF1O43189 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF1O43189 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHF1O43189 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF1O43189 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF1O43189 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF1O43189 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.64■□□□□ 0.73
PHF1O43189 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PHF1O43189 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
PHF1O43189 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.64■□□□□ 0.73
PHF1O43189 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF1O43189 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF1O43189 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF1O43189 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
PHF1O43189 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PHF1O43189 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF1O43189 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF1O43189 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF1O43189 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF1O43189 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PHF1O43189 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF1O43189 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF1O43189 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHF1O43189 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHF1O43189 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PHF1O43189 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.62■□□□□ 0.73
PHF1O43189 TSPY9P-201ENST00000440215 945 ntBASIC19.62■□□□□ 0.73
PHF1O43189 TSPY11P-201ENST00000442607 1045 ntBASIC19.62■□□□□ 0.73
PHF1O43189 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.62■□□□□ 0.73
PHF1O43189 AC120024.1-201ENST00000562672 995 ntBASIC19.62■□□□□ 0.73
PHF1O43189 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PHF1O43189 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms