Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ABCC4O15439 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ABCC4O15439 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ABCC4O15439 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
ABCC4O15439 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.47■■■□□ 2.31
ABCC4O15439 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
ABCC4O15439 LINC00543-201ENST00000567234 1845 ntBASIC29.47■■■□□ 2.31
ABCC4O15439 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ABCC4O15439 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.46■■■□□ 2.31
ABCC4O15439 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 AL139246.5-201ENST00000606645 996 ntBASIC29.46■■■□□ 2.31
ABCC4O15439 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.46■■■□□ 2.31
ABCC4O15439 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.46■■■□□ 2.31
ABCC4O15439 AF131216.4-201ENST00000638924 1588 ntBASIC29.46■■■□□ 2.31
ABCC4O15439 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
ABCC4O15439 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 AC093323.1-202ENST00000635031 2045 ntBASIC29.46■■■□□ 2.31
ABCC4O15439 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.46■■■□□ 2.31
ABCC4O15439 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ABCC4O15439 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
ABCC4O15439 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCC4O15439 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCC4O15439 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCC4O15439 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCC4O15439 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.45■■■□□ 2.3
ABCC4O15439 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.45■■■□□ 2.3
ABCC4O15439 AL136116.3-201ENST00000402907 1138 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.45■■■□□ 2.3
ABCC4O15439 MIR3621-201ENST00000580529 85 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 MTDHP2-201ENST00000601468 714 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 MIR6724-1-201ENST00000616420 92 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 MIR6724-2-201ENST00000616483 92 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 MIR6724-4-201ENST00000617390 92 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 MIR6724-3-201ENST00000622482 92 ntBASIC29.45■■■□□ 2.3
ABCC4O15439 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCC4O15439 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ABCC4O15439 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCC4O15439 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.44■■■□□ 2.3
ABCC4O15439 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.44■■■□□ 2.3
ABCC4O15439 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCC4O15439 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCC4O15439 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCC4O15439 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.43■■■□□ 2.3
ABCC4O15439 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCC4O15439 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCC4O15439 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCC4O15439 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
ABCC4O15439 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCC4O15439 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCC4O15439 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCC4O15439 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.42■■■□□ 2.3
ABCC4O15439 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCC4O15439 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.42■■■□□ 2.3
ABCC4O15439 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.42■■■□□ 2.3
ABCC4O15439 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
ABCC4O15439 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCC4O15439 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
ABCC4O15439 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.42■■■□□ 2.3
ABCC4O15439 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCC4O15439 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ABCC4O15439 AC141586.4-201ENST00000624558 1573 ntBASIC29.41■■■□□ 2.3
ABCC4O15439 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ABCC4O15439 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ABCC4O15439 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCC4O15439 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.41■■■□□ 2.3
ABCC4O15439 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.41■■■□□ 2.3
ABCC4O15439 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ABCC4O15439 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
ABCC4O15439 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ABCC4O15439 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
ABCC4O15439 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.4■■■□□ 2.3
ABCC4O15439 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCC4O15439 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
ABCC4O15439 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCC4O15439 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.4■■■□□ 2.3
ABCC4O15439 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCC4O15439 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
ABCC4O15439 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCC4O15439 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCC4O15439 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.39■■■□□ 2.3
ABCC4O15439 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
ABCC4O15439 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.39■■■□□ 2.3
ABCC4O15439 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.39■■■□□ 2.3
ABCC4O15439 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
ABCC4O15439 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.38■■■□□ 2.29
ABCC4O15439 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.38■■■□□ 2.29
ABCC4O15439 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCC4O15439 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
ABCC4O15439 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCC4O15439 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCC4O15439 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCC4O15439 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCC4O15439 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.37■■■□□ 2.29
ABCC4O15439 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.37■■■□□ 2.29
ABCC4O15439 MIR4466-201ENST00000606121 54 ntBASIC29.37■■■□□ 2.29
ABCC4O15439 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms