Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TO15178 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.22■□□□□ 0.99
TO15178 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
TO15178 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.21■□□□□ 0.99
TO15178 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TO15178 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.21■□□□□ 0.99
TO15178 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.21■□□□□ 0.99
TO15178 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.21■□□□□ 0.99
TO15178 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.21■□□□□ 0.99
TO15178 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TO15178 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.2■□□□□ 0.98
TO15178 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TO15178 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TO15178 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TO15178 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TO15178 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TO15178 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TO15178 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TO15178 GUSBP5-201ENST00000418136 578 ntBASIC21.19■□□□□ 0.98
TO15178 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.19■□□□□ 0.98
TO15178 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.19■□□□□ 0.98
TO15178 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.19■□□□□ 0.98
TO15178 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.19■□□□□ 0.98
TO15178 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TO15178 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.19■□□□□ 0.98
TO15178 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.19■□□□□ 0.98
TO15178 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
TO15178 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TO15178 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
TO15178 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TO15178 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TO15178 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TO15178 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.18■□□□□ 0.98
TO15178 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.18■□□□□ 0.98
TO15178 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.18■□□□□ 0.98
TO15178 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.18■□□□□ 0.98
TO15178 MIR6722-201ENST00000617286 78 ntBASIC21.18■□□□□ 0.98
TO15178 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TO15178 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TO15178 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TO15178 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.17■□□□□ 0.98
TO15178 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
TO15178 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TO15178 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TO15178 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.17■□□□□ 0.98
TO15178 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.17■□□□□ 0.98
TO15178 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TO15178 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TO15178 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TO15178 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TO15178 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TO15178 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TO15178 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.16■□□□□ 0.98
TO15178 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TO15178 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TO15178 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.15■□□□□ 0.98
TO15178 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TO15178 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TO15178 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TO15178 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TO15178 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TO15178 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.15■□□□□ 0.98
TO15178 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TO15178 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TO15178 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.15■□□□□ 0.98
TO15178 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TO15178 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TO15178 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TO15178 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.14■□□□□ 0.97
TO15178 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TO15178 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TO15178 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.14■□□□□ 0.97
TO15178 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.14■□□□□ 0.97
TO15178 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TO15178 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TO15178 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TO15178 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TO15178 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TO15178 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
TO15178 UNC93B8-201ENST00000511903 705 ntBASIC21.13■□□□□ 0.97
TO15178 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
TO15178 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TO15178 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TO15178 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TO15178 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TO15178 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms