Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CHD1O14646 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
CHD1O14646 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CHD1O14646 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC38.15■■■■□ 3.7
CHD1O14646 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC38.15■■■■□ 3.7
CHD1O14646 TSPY26P-201ENST00000476365 1326 ntBASIC38.14■■■■□ 3.7
CHD1O14646 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CHD1O14646 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC38.14■■■■□ 3.7
CHD1O14646 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CHD1O14646 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
CHD1O14646 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC38.13■■■■□ 3.69
CHD1O14646 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC38.13■■■■□ 3.69
CHD1O14646 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
CHD1O14646 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC38.12■■■■□ 3.69
CHD1O14646 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CHD1O14646 AP004609.3-201ENST00000610705 1884 ntBASIC38.12■■■■□ 3.69
CHD1O14646 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CHD1O14646 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC38.12■■■■□ 3.69
CHD1O14646 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CHD1O14646 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC38.11■■■■□ 3.69
CHD1O14646 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
CHD1O14646 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC38.11■■■■□ 3.69
CHD1O14646 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
CHD1O14646 MIR6084-201ENST00000622012 110 ntBASIC38.11■■■■□ 3.69
CHD1O14646 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CHD1O14646 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC38.11■■■■□ 3.69
CHD1O14646 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC38.11■■■■□ 3.69
CHD1O14646 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
CHD1O14646 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC38.1■■■■□ 3.69
CHD1O14646 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CHD1O14646 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CHD1O14646 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CHD1O14646 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CHD1O14646 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC38.09■■■■□ 3.69
CHD1O14646 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC38.09■■■■□ 3.69
CHD1O14646 AL358852.1-201ENST00000623174 1268 ntBASIC38.09■■■■□ 3.69
CHD1O14646 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC38.09■■■■□ 3.69
CHD1O14646 NME4-202ENST00000382940 766 ntTSL 3 BASIC38.09■■■■□ 3.69
CHD1O14646 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
CHD1O14646 NME4-211ENST00000620944 1193 ntTSL 2 BASIC38.09■■■■□ 3.69
CHD1O14646 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC38.09■■■■□ 3.69
CHD1O14646 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC38.08■■■■□ 3.69
CHD1O14646 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC38.08■■■■□ 3.69
CHD1O14646 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
CHD1O14646 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
CHD1O14646 AC009102.2-201ENST00000606772 1639 ntBASIC38.08■■■■□ 3.69
CHD1O14646 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
CHD1O14646 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
CHD1O14646 GXYLT1P2-201ENST00000433312 1230 ntBASIC38.07■■■■□ 3.69
CHD1O14646 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC38.07■■■■□ 3.68
CHD1O14646 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CHD1O14646 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CHD1O14646 AC104771.1-201ENST00000603335 964 ntBASIC38.06■■■■□ 3.68
CHD1O14646 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC38.06■■■■□ 3.68
CHD1O14646 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC38.05■■■■□ 3.68
CHD1O14646 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC38.05■■■■□ 3.68
CHD1O14646 AC126544.1-201ENST00000580842 1059 ntBASIC38.05■■■■□ 3.68
CHD1O14646 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
CHD1O14646 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC38.04■■■■□ 3.68
CHD1O14646 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
CHD1O14646 TERF1P2-201ENST00000583350 1212 ntBASIC38.04■■■■□ 3.68
CHD1O14646 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC38.04■■■■□ 3.68
CHD1O14646 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
CHD1O14646 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC38.04■■■■□ 3.68
CHD1O14646 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC38.04■■■■□ 3.68
CHD1O14646 AC131274.2-201ENST00000580697 1507 ntBASIC38.04■■■■□ 3.68
CHD1O14646 AC241377.3-202ENST00000626088 1088 ntBASIC38.03■■■■□ 3.68
CHD1O14646 AC241585.3-202ENST00000628937 1088 ntBASIC38.03■■■■□ 3.68
CHD1O14646 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC38.03■■■■□ 3.68
CHD1O14646 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CHD1O14646 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
CHD1O14646 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC38.03■■■■□ 3.68
CHD1O14646 GXYLT1P5-201ENST00000614548 1189 ntBASIC38.02■■■■□ 3.68
CHD1O14646 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC38.01■■■■□ 3.68
CHD1O14646 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC38.01■■■■□ 3.67
CHD1O14646 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC38.01■■■■□ 3.67
CHD1O14646 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC38.01■■■■□ 3.67
CHD1O14646 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
CHD1O14646 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CHD1O14646 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC37.99■■■■□ 3.67
CHD1O14646 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC37.99■■■■□ 3.67
CHD1O14646 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC37.99■■■■□ 3.67
CHD1O14646 AC066615.1-201ENST00000640911 628 ntBASIC37.99■■■■□ 3.67
CHD1O14646 AC073111.5-205ENST00000641717 521 ntBASIC37.99■■■■□ 3.67
CHD1O14646 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CHD1O14646 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC37.99■■■■□ 3.67
CHD1O14646 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
CHD1O14646 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC37.98■■■■□ 3.67
CHD1O14646 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC37.98■■■■□ 3.67
CHD1O14646 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC37.98■■■■□ 3.67
CHD1O14646 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC37.98■■■■□ 3.67
CHD1O14646 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
CHD1O14646 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC37.98■■■■□ 3.67
CHD1O14646 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
CHD1O14646 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC37.96■■■■□ 3.67
CHD1O14646 AICDA-202ENST00000537228 667 ntTSL 5 BASIC37.96■■■■□ 3.67
CHD1O14646 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC37.96■■■■□ 3.67
CHD1O14646 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
CHD1O14646 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
CHD1O14646 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC37.95■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms