Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25■■□□□ 1.59
SOX1O00570 AL109923.1-201ENST00000618799 583 ntBASIC25■■□□□ 1.59
SOX1O00570 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SOX1O00570 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SOX1O00570 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SOX1O00570 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SOX1O00570 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SOX1O00570 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SOX1O00570 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SOX1O00570 AC126544.1-201ENST00000580842 1059 ntBASIC24.99■■□□□ 1.59
SOX1O00570 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.98■■□□□ 1.59
SOX1O00570 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SOX1O00570 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
SOX1O00570 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SOX1O00570 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SOX1O00570 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.98■■□□□ 1.59
SOX1O00570 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.98■■□□□ 1.59
SOX1O00570 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.98■■□□□ 1.59
SOX1O00570 AC093827.2-201ENST00000512654 315 ntBASIC24.98■■□□□ 1.59
SOX1O00570 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.98■■□□□ 1.59
SOX1O00570 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.97■■□□□ 1.59
SOX1O00570 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SOX1O00570 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SOX1O00570 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SOX1O00570 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SOX1O00570 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SOX1O00570 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.97■■□□□ 1.59
SOX1O00570 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
SOX1O00570 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.97■■□□□ 1.59
SOX1O00570 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.97■■□□□ 1.59
SOX1O00570 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SOX1O00570 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
SOX1O00570 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SOX1O00570 AC006455.2-201ENST00000429931 906 ntBASIC24.96■■□□□ 1.59
SOX1O00570 AC006015.1-201ENST00000429970 570 ntBASIC24.96■■□□□ 1.59
SOX1O00570 AC026185.1-201ENST00000445748 174 ntBASIC24.96■■□□□ 1.59
SOX1O00570 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.96■■□□□ 1.59
SOX1O00570 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
SOX1O00570 TERF1P2-201ENST00000583350 1212 ntBASIC24.96■■□□□ 1.59
SOX1O00570 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SOX1O00570 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SOX1O00570 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.96■■□□□ 1.59
SOX1O00570 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.96■■□□□ 1.59
SOX1O00570 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.95■■□□□ 1.58
SOX1O00570 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.95■■□□□ 1.58
SOX1O00570 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.95■■□□□ 1.58
SOX1O00570 AL499627.2-201ENST00000606283 725 ntBASIC24.95■■□□□ 1.58
SOX1O00570 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.95■■□□□ 1.58
SOX1O00570 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.95■■□□□ 1.58
SOX1O00570 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SOX1O00570 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.94■■□□□ 1.58
SOX1O00570 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
SOX1O00570 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.94■■□□□ 1.58
SOX1O00570 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.94■■□□□ 1.58
SOX1O00570 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
SOX1O00570 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SOX1O00570 AC090877.2-201ENST00000558441 1738 ntBASIC24.94■■□□□ 1.58
SOX1O00570 FOXO3B-201ENST00000395675 1928 ntBASIC24.94■■□□□ 1.58
SOX1O00570 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
SOX1O00570 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SOX1O00570 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SOX1O00570 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SOX1O00570 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SOX1O00570 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SOX1O00570 AC012414.1-201ENST00000556676 535 ntBASIC24.92■■□□□ 1.58
SOX1O00570 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SOX1O00570 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SOX1O00570 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SOX1O00570 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
SOX1O00570 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SOX1O00570 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
SOX1O00570 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SOX1O00570 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.91■■□□□ 1.58
SOX1O00570 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.91■■□□□ 1.58
SOX1O00570 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SOX1O00570 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SOX1O00570 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SOX1O00570 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SOX1O00570 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.9■■□□□ 1.58
SOX1O00570 CROCCP5-201ENST00000436658 830 ntBASIC24.9■■□□□ 1.58
SOX1O00570 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.9■■□□□ 1.58
SOX1O00570 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SOX1O00570 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SOX1O00570 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
SOX1O00570 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SOX1O00570 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.89■■□□□ 1.58
SOX1O00570 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SOX1O00570 MIR3181-201ENST00000578512 73 ntBASIC24.89■■□□□ 1.58
SOX1O00570 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SOX1O00570 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.88■■□□□ 1.57
SOX1O00570 AC009102.2-201ENST00000606772 1639 ntBASIC24.88■■□□□ 1.57
SOX1O00570 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SOX1O00570 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.88■■□□□ 1.57
SOX1O00570 AC006970.2-201ENST00000450065 779 ntBASIC24.88■■□□□ 1.57
SOX1O00570 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.88■■□□□ 1.57
SOX1O00570 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
SOX1O00570 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SOX1O00570 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.87■■□□□ 1.57
SOX1O00570 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
SOX1O00570 KRT18P61-201ENST00000585825 1298 ntBASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms