Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 AC021242.3-201ENST00000607598 1377 ntBASIC19.35■□□□□ 0.69
SRRM5B3KS81 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SRRM5B3KS81 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM5B3KS81 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM5B3KS81 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM5B3KS81 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SRRM5B3KS81 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SRRM5B3KS81 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM5B3KS81 GUSBP5-201ENST00000418136 578 ntBASIC19.35■□□□□ 0.69
SRRM5B3KS81 Z92544.1-202ENST00000571933 1220 ntBASIC19.35■□□□□ 0.69
SRRM5B3KS81 AC004812.2-201ENST00000611079 2094 ntBASIC19.35■□□□□ 0.69
SRRM5B3KS81 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM5B3KS81 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.35■□□□□ 0.69
SRRM5B3KS81 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
SRRM5B3KS81 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.35■□□□□ 0.69
SRRM5B3KS81 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM5B3KS81 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM5B3KS81 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM5B3KS81 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SRRM5B3KS81 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SRRM5B3KS81 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.33■□□□□ 0.69
SRRM5B3KS81 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.33■□□□□ 0.68
SRRM5B3KS81 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.33■□□□□ 0.68
SRRM5B3KS81 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRRM5B3KS81 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
SRRM5B3KS81 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRRM5B3KS81 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM5B3KS81 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM5B3KS81 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM5B3KS81 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.32■□□□□ 0.68
SRRM5B3KS81 AC004448.1-201ENST00000458332 883 ntBASIC19.32■□□□□ 0.68
SRRM5B3KS81 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.32■□□□□ 0.68
SRRM5B3KS81 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.32■□□□□ 0.68
SRRM5B3KS81 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.32■□□□□ 0.68
SRRM5B3KS81 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM5B3KS81 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM5B3KS81 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SRRM5B3KS81 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM5B3KS81 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM5B3KS81 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM5B3KS81 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM5B3KS81 KRT125P-201ENST00000546827 989 ntBASIC19.31■□□□□ 0.68
SRRM5B3KS81 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.31■□□□□ 0.68
SRRM5B3KS81 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SRRM5B3KS81 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM5B3KS81 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM5B3KS81 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.3■□□□□ 0.68
SRRM5B3KS81 SNX5-217ENST00000606557 1087 ntBASIC19.3■□□□□ 0.68
SRRM5B3KS81 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM5B3KS81 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM5B3KS81 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM5B3KS81 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM5B3KS81 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.29■□□□□ 0.68
SRRM5B3KS81 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM5B3KS81 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRRM5B3KS81 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM5B3KS81 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.29■□□□□ 0.68
SRRM5B3KS81 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM5B3KS81 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.28■□□□□ 0.68
SRRM5B3KS81 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM5B3KS81 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM5B3KS81 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM5B3KS81 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SRRM5B3KS81 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.28■□□□□ 0.68
SRRM5B3KS81 AC131212.1-201ENST00000613771 668 ntBASIC19.28■□□□□ 0.68
SRRM5B3KS81 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM5B3KS81 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM5B3KS81 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM5B3KS81 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM5B3KS81 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM5B3KS81 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM5B3KS81 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM5B3KS81 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.27■□□□□ 0.68
SRRM5B3KS81 AC239859.2-201ENST00000444165 318 ntBASIC19.27■□□□□ 0.68
SRRM5B3KS81 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.27■□□□□ 0.68
SRRM5B3KS81 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.27■□□□□ 0.68
SRRM5B3KS81 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM5B3KS81 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM5B3KS81 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.27■□□□□ 0.67
SRRM5B3KS81 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM5B3KS81 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM5B3KS81 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.26■□□□□ 0.67
SRRM5B3KS81 MIR4787-201ENST00000607364 84 ntBASIC19.26■□□□□ 0.67
SRRM5B3KS81 AC092028.1-203ENST00000608262 953 ntBASIC19.26■□□□□ 0.67
SRRM5B3KS81 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM5B3KS81 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM5B3KS81 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM5B3KS81 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM5B3KS81 ABCB10P4-201ENST00000566803 2184 ntBASIC19.26■□□□□ 0.67
SRRM5B3KS81 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM5B3KS81 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms